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Name : gabD2 (PSPPH_2572) Accession : YP_274767.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 2965856 - 2967286 bp Length : 1431 bp Strand : + Note : identified by similarity to SP:P25526; match to protein family HMM PF00171 DNA sequence : ATGTATCCAGACGTACAGCTTTATATCGATGGCCAATGGCGCGCGAGCCGCGATGGCCGTTCCATTCCGGTCATAGACCC TGCAACCGGCCAGTCGCTGGGCAGTGTGGCACATGCCGGTATCACCGACCTTGACGAAGCCCTGGCGGCGGCCGAGCGTG GCTTTGCCACCTGGCGCGCGACCTCGGCCTATGATCGCTACAAGCTGATGCAGAAAGCCGCGAACCTTATTCGCGAGCGT GCCGACAACATTGCCCGGATCCTGACCCAGGAGCAGGGCAAGCCCTTGGCCGAGGCGCGGATGGAAACCCTTTCTGCCGC TGATGTCATCGACTGGCTGGCCGAGGAAGGGCGTCGCAGCTATGGCCGTATCGTGCCTTCGCGTGGCGTGGCCATTGAGC AGAAGGTCGTCAAGGAGCCGGTCGGTCCGGTTGCGGCGTTCACACCGTGGAATTTTCCGATCAATCAGGTGGTGCGCAAG TTGTCGTCTGCACTGGCAGCCGGGTGCTCGATCATCGTCAAGGCTCCGGAAGAAACTCCGGCGTCGCCTGCCGAGCTGAT TCGGGCGTTTGCCGATGCCGGTGTTCCGGCAGGCGTGATTGGTCTGGTCTACGGCGATCCGGCTGAAATCTCTGGCTACC TGATCCCGCATCCGGTGATTCGCAAGGTCACGTTTACCGGTTCGACACCGGTCGGCAAGCAACTGGCTGCACTCGCCGGG AAACATATGAAGCGGGCAACCATGGAGCTGGGTGGTCATGCGCCGGCGCTGGTGTTCGATGACGCTGATATCGACCTCGC TGCGCGCGTGCTGGCCACCGCGAAGTTCCGCAATGCCGGACAGGTCTGCGTATCGCCGACGCGGATTCTGGTACAACGCA AGGTGCTGGATGCGTTCACCGAGAGGTTTGTGGGCCTGACCCGCGAGATCAAGGTCGGCAACGGTCTGGAGGCGGGCACC ACGATGGGGCCGGTAGCCAACGAGCGACGTATTCCTGCGCTGGTCGATCTGATCGAAGACGCTGTGCGTGGCGGTGCAAC CCTGTCTGCCGGAGGTAAGGCTGTCGAGGGGGCGGGCTATTTCTTCGAGCCAACCGTATTGAGTGGCCTGACACCGCAAA TGCGCATCATGAACGAGGAGCCTTTCGGGCCGGTTGCGCTGCTGGTGCCGTTCGACACGGTTGAAGAGGCTATTGCCGAA TCCAACCGGGTGCCGTTCGGGCTGGCGTCCTACGCATTTACGACCTCGATGAAGACCGCTCAGGCACTGAGTACTTACAT TGAGGCGGGCATGCTGTCGATCAACCATCAGGGTATCGGCTTGCCGGAAGTCCCGTTCGGCGGGATCAAGGATTCCGGTT ACGGTTCCGAAGGCGGCACCGAGGCCATTGAGGCTTACCTGAACACCAAGTTGGTCACTCAGTACAACTGA Protein sequence : MYPDVQLYIDGQWRASRDGRSIPVIDPATGQSLGSVAHAGITDLDEALAAAERGFATWRATSAYDRYKLMQKAANLIRER ADNIARILTQEQGKPLAEARMETLSAADVIDWLAEEGRRSYGRIVPSRGVAIEQKVVKEPVGPVAAFTPWNFPINQVVRK LSSALAAGCSIIVKAPEETPASPAELIRAFADAGVPAGVIGLVYGDPAEISGYLIPHPVIRKVTFTGSTPVGKQLAALAG KHMKRATMELGGHAPALVFDDADIDLAARVLATAKFRNAGQVCVSPTRILVQRKVLDAFTERFVGLTREIKVGNGLEAGT TMGPVANERRIPALVDLIEDAVRGGATLSAGGKAVEGAGYFFEPTVLSGLTPQMRIMNEEPFGPVALLVPFDTVEEAIAE SNRVPFGLASYAFTTSMKTAQALSTYIEAGMLSINHQGIGLPEVPFGGIKDSGYGSEGGTEAIEAYLNTKLVTQYN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-83 | 43 |
