Gene Information

Name : PSPPH_2501 (PSPPH_2501)
Accession : YP_274698.1
Strain : Pseudomonas syringae 1448A
Genome accession: NC_005773
Putative virulence/resistance : Virulence
Product : cation ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 2887785 - 2888534 bp
Length : 750 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence :
ATGAGTGCAGCCATTGCTCTGGAAAACCTTACTGTGGCCTATGAGCGCCGCCCGGCGGTGCACCACATCAGCGGGCGGTT
CGAGGCGGGCAGCCTGACGGCCATCGTCGGGCCGAACGGGGCGGGTAAATCGACCTTGATCAAGGCCATCGCCGGCACCA
TGAAGCCTGCGCAGGGGCGCGTCGACCGTGGCCGCCTGGCGACCCGCACGATCGGCTACCTGCCCCAGGCCGCAGAAATC
GATCGCAGTTTTCCGCTGAGCGTCGCCGATACCGTTTCGATGGGCGCCTGGCACAGCATCGGGCCGTTTCGCAGCCTGAC
ACGCAATCATGCGCGATTGACCGGGGAAGCGCTGAGCACGGTCGGCCTGGAGGGTTTTGAAGGGCGCAGCGTCGGTTCGT
TGTCGTCCGGCCAGTTCCAGCGGGTGCTGTTTGCCCGATTGCTGCTGCAGGATGCTTCTGTGATTCTGCTCGACGAGCCA
TTTACCGCCATCGACGCACGCACCACCCGTGATCTGCTGGAGCTGGTGCGCGCCTGGCATGGGCAGGGGCGCACAGTGAT
CGCGGTCCTGCACGATATCGAACAGGTTCGTCAGCACTTTCCGCAAACCCTGCTGATGGCCCGTGAAGCCATTGCCTGGG
GCGAAACCTCGCAAGTGCTCAGCGCCGCCAACCTGCGCAAGGCGCGCAACATGGCCGAGTACTGGAGCCCGGACGCCTTG
CTGTGTGATAGCGAGGACGAGCGCTCATGA

Protein sequence :
MSAAIALENLTVAYERRPAVHHISGRFEAGSLTAIVGPNGAGKSTLIKAIAGTMKPAQGRVDRGRLATRTIGYLPQAAEI
DRSFPLSVADTVSMGAWHSIGPFRSLTRNHARLTGEALSTVGLEGFEGRSVGSLSSGQFQRVLFARLLLQDASVILLDEP
FTAIDARTTRDLLELVRAWHGQGRTVIAVLHDIEQVRQHFPQTLLMAREAIAWGETSQVLSAANLRKARNMAEYWSPDAL
LCDSEDERS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33755.1 putative ABC transporter ATP-binding protein Virulence PAI I 536 Protein 6e-45 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPPH_2501 YP_274698.1 cation ABC transporter ATP-binding protein VFG1496 Protein 3e-45 47