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Name : tex (PSPPH_0245) Accession : YP_272550.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Unknown Product : S1 RNA-binding domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 283619 - 285940 bp Length : 2322 bp Strand : - Note : identified by match to protein family HMM PF00575 DNA sequence : ATGGACAGCATCAACAGCCGCATCGCCGAAGAACTCGGCGTACGCCCACAACAGGTCGCAGCGGCCGTAGCACTACTGGA TGAAGGCTCGACCGTGCCCTTCATTTCCCGCTACCGCAAGGAAGTGACCGGCAGTCTTGATGACACGCAATTGCGCCATC TGGAAGAACGCCTGCGCTATCTGCGTGAGCTGGATGACCGGCGTGTCAGCATTCTTGCCAGCATTGAAGAGCAAGGCAAG CTGACCCCGGAGCTGGCTCGCGACATCAAGCTGGCCGACACCAAGACCCGCCTTGAAGATTTGTACCTGCCTTATAAGCA GAAACGTCGCACCAAGGGCCAGATCGCCCTTGAAGCCGGTCTGGGCGAGCTGGCTGACGGCCTGTTCAACGACCCGAGCC TCGCTCCTGAAACCGAAGCAGCCCGTTTTGTCGACGCCGAGAAAGGCGTGGCCGATGTCAAGGCTGCGCTGGAAGGCGCC AAGTGCATCCTGATGGAACGCTTCGCCGAAGACGCATCGTTGCTCGACAAGTTGCGCAGCTTCCTCAAACAGGAAGCAGT AATCAGCGCACGCGTGGTGCCGGGCAAGGAAGAGGAGGGTGCCAAGTTCCGCGATTATTTCGAACACGACGAGCCACTCA AGAGCATGCCTTCGCACCGTGCACTGGCGATTTTCCGCGGCCGCAACGAAGGTTTTCTCAGCTCCGCACTGAAAGTCGGT GAAGAACTGCCGGGTGCCATGCACCCTTGCGAACTGATGATCGGTGAACGCTTCGGCATCCAGAACCAGAACCGCCCCGC AGACAAATGGCTGGCAGAGGTGGTGCGCTGGACCTGGAAGGTCAAGTTGTACAGCCACCTGGAAACCGACCTGCTGGGCG AGCTGCGCGACGGCGCGGAGACCGAAGCCATCAACGTTTTCGCCCACAACCTGCACGACCTGCTGCTCGCCGCCCCGGCT GGCCAGCGCGCCACACTGGGTCTGGACCCGGGCCTGCGCACCGGCTGCAAGGTCGCTGTGGTGGACGCAACCGGCAAGCT GCTCGACTACGCGACCGTTTACCCGCATGTGCCGAAGAACCAGTGGGATCAGACCATTGCTGTGCTGGCTGCCCTGTGTG CCAAGCACTCGGTCGACCTGATCGCTATCGGCAACGGCACCGCCAGCCGCGAAACCGACAAGCTCGCCGCTGACCTGATC AAAAAATACCCAGGTCTGAAAATGACCAAGGTCATGGTTTCCGAAGCAGGCGCATCGGTTTATTCCGCGTCGGAACTGGC CGCCAAGGAATTCCCGGACCTCGACGTATCGATCCGTGGCGCGGTCTCGATTGCCCGTCGCTTGCAGGACCCGCTCGCCG AACTGGTGAAAATCGATCCCAAGTCCATCGGTGTCGGTCAGTATCAGCATGACGTCTCGCAGCTGAAACTGGCGCGCGGC CTGGACGCGGTGGTTGAAGACTGCGTGAACGCTGTGGGCGTGGACGTGAACACCGCTTCGGTGGCGTTGCTGGCGCGGAT TTCCGGGCTTAACACCACACTGGCGCAGAACATCGTTGCGCATCGCGATGAAAACGGCGCGTTCAAGACGCGTGCAGCGC TGAAGAAAGTCAGCCGTCTGGGCGAAAAGACCTTTGAACAGGCAGCAGGCTTCCTGCGCGTGATGACCGGTGACAACCCG CTGGACTCTTCTGCCGTTCACCCGGAAGCCTATCCACTGGTGCAGCGTATTGCGGCAGAAACCGACCGCGATATTCGCTC GTTGATTGGCGATGCGAGCTTTCTCAAACGCCTGGACCCGAAGAAATTCACCGACGAGACCTTTGGTCTGCCAACTGTGA CCGACATTCTGCAGGAACTCGAAAAACCGGGTCGCGACCCGCGTCCGGAGTTCAAGACGGCAGAGTTTCAGGACGGTGTC GAAGAACTCAAGGACCTGCAACCGGGCATGATTCTCGAAGGCGTGGTCACCAACGTCACCAATTTCGGTGCGTTCGTCGA TATCGGCGTGCATCAGGACGGTCTGGTACACATCTCGGCATTGTCCGAGAAGTTCATCAAGGACCCGCGTGAGGCGGTCA AGGCCGGTGATGTGGTGAAAGTGAAGGTCATGGAAGTCGACATTCCGCGCAAACGCGTCGGCCTGTCGATGCGCATGAGC GACACGCCCGGCGAGAAGGTCGACGGTGCACGCGGTGCACGCCCAGGTTCCTCGCCTCGCCAGCAGAACAGCGCTCCACG CAAGGAAACCACAGCACCCGCGCCCATCAACAACGCAATGGCTTCGCTGTTTGCCAATGCCAAGCAGTTGAAGAAGCGCT GA Protein sequence : MDSINSRIAEELGVRPQQVAAAVALLDEGSTVPFISRYRKEVTGSLDDTQLRHLEERLRYLRELDDRRVSILASIEEQGK LTPELARDIKLADTKTRLEDLYLPYKQKRRTKGQIALEAGLGELADGLFNDPSLAPETEAARFVDAEKGVADVKAALEGA KCILMERFAEDASLLDKLRSFLKQEAVISARVVPGKEEEGAKFRDYFEHDEPLKSMPSHRALAIFRGRNEGFLSSALKVG EELPGAMHPCELMIGERFGIQNQNRPADKWLAEVVRWTWKVKLYSHLETDLLGELRDGAETEAINVFAHNLHDLLLAAPA GQRATLGLDPGLRTGCKVAVVDATGKLLDYATVYPHVPKNQWDQTIAVLAALCAKHSVDLIAIGNGTASRETDKLAADLI KKYPGLKMTKVMVSEAGASVYSASELAAKEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG LDAVVEDCVNAVGVDVNTASVALLARISGLNTTLAQNIVAHRDENGAFKTRAALKKVSRLGEKTFEQAAGFLRVMTGDNP LDSSAVHPEAYPLVQRIAAETDRDIRSLIGDASFLKRLDPKKFTDETFGLPTVTDILQELEKPGRDPRPEFKTAEFQDGV EELKDLQPGMILEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMS DTPGEKVDGARGARPGSSPRQQNSAPRKETTAPAPINNAMASLFANAKQLKKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 62 |
