Gene Information

Name : gspG2 (PSPPH_2177)
Accession : YP_274392.1
Strain : Pseudomonas syringae 1448A
Genome accession: NC_005773
Putative virulence/resistance : Virulence
Product : general secretion pathway protein GspG
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 2529792 - 2530241 bp
Length : 450 bp
Strand : +
Note : identified by match to protein family HMM PF07963; match to protein family HMM TIGR01710; match to protein family HMM TIGR02532

DNA sequence :
ATGGATGTCGCACGCGTCAAGCCTCGGTCTGGAGGCCGTCGCGGCCAGGACGGTTTTACCCTGATCGAAATAATGGTGGT
CGTGGTTATTCTGGGCATTCTGGCCGCTGTTGTGGTGCCCAGGGTTCTTGACCGTCCGGACCAGGCGCGGGCTGCTGCTG
CCCGGCAGGATATCGCAGGGCTGATGCAGGCGCTCAAGCTCTATCGCCTCGACCACGGCACTTACCCCAATCAGGCTCAG
AGCCTGAAAGCTCTGGTCGAGCGGCCGGCCAACATCAACAAAAACAACTGGCGCGCCTATGTCGAGCGGCTACCCAATGA
TCCGTGGGGACACCCCTATCATTATCTGAACCCCGGCGTTAACGGCGAGGTGGATCTTTTTTCTCTGGGTGCCGACGGTC
AGCCCGATGGCGAGGGTGTCAATGCTGATATCGGCTCATGGCAGCTCTGA

Protein sequence :
MDVARVKPRSGGRRGQDGFTLIEIMVVVVILGILAAVVVPRVLDRPDQARAAAARQDIAGLMQALKLYRLDHGTYPNQAQ
SLKALVERPANINKNNWRAYVERLPNDPWGHPYHYLNPGVNGEVDLFSLGADGQPDGEGVNADIGSWQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 5e-24 51
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 3e-24 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspG2 YP_274392.1 general secretion pathway protein GspG VFG1871 Protein 6e-27 56
gspG2 YP_274392.1 general secretion pathway protein GspG VFG0180 Protein 3e-25 55
gspG2 YP_274392.1 general secretion pathway protein GspG VFG2050 Protein 1e-24 51