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Name : kdpB (PSPPH_2018) Accession : YP_274239.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Unknown Product : K+-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.12 Position : 2370201 - 2371757 bp Length : 1557 bp Strand : + Note : identified by match to protein family HMM PF00122; match to protein family HMM TIGR01494; match to protein family HMM TIGR01497 DNA sequence : ATGAGCACTACTGATTTTTCAAGACGTGATGCTGTAAAAACTGCCGAGCCTCAGGCCGCCAGCGAGTCAGCCAAGACCGG CATCGCTGCCCTGTGGCGTCCGGCGCTGGTGCAGGCGTTCGTCAAGCTCGACCCGCGCCAGCTCAAGCGTTCGCCAGTGA TGCTGGTGGTGGAACTGACTGCCATTCTGACCACCGTGCTGTGCGTCATCCCCAACCCGCAGGTGCCAACTTCGGTCTGC GTGCAGATCGCCCTGTGGTTGTGGTTCACCGTGCTGTTCGCCAACTTCGCCGAAGCGCTGGCCGAAGGTCGTGGCAAGGC CCGCGCCGACAGCCTCAAGGCCGGCAGCGAAGGGCTCAAGGCGCGCATTCGTGATGAGAACGGCAGCCTGCGCACCATCA ACGCCAGCGAGTTGCGCAAGGGCGATGTGGTGCGTGTCGACGCCGGGGAAATGATCCCTGGCGACGGCGAAGTCATCGAA GGCATCGCGGCGGTCAACGAGGCGGCGATTACCGGCGAGTCAGCCCCGGTTATTCGTGAATCCGGCGGCGACCGCTCGGC CGTCACCGGCAACACCCGGCTGGTGTCCGACTGGCTGCTGATACGCATCAGCACCAACCCCGGCGAATCGACGCTGGACC GTATGATTGCGCTGGTGGAAGGTGCCAAGCGGCAGAAGACCCCTAACGAAGTCGCGCTGGATATTCTGCTGATCGGCCTG ACCCTGATCTTTCTGCTGGTGGTCATCACCTTGCAGCCGTTCGCCCACTTTGCCGGGGGCAGCCTGCCGCTGGTGTTTCT GGTAGCACTCCTGGTCACCCTGATCCCGACCACCATTGGCGGCCTGCTGTCGGCCATCGGCATTGCCGGCATGGACCGGC TGGTGCGCCTCAACGTGATCGCCAAGTCCGGTCGCGCCGTGGAAGCTGCGGGCGATGTGCATGTGCTGTTGCTGGAAAAG ACCGGCACCATCACCTTCGGCAATCGCCGCTGCGCTGCCGTTTACGCAGCACCCGGCGTGACCCCGAAGGAACTGGGCGA GGGTGCTTTGCTGGCGTCGCTGGCCGACGATACGGCGGAAGGCAAATCCATCGTCGAGTTCCTGCGCAACCTGCACCCGA TGAACGAGCCCACCCTGAGTTCGGTAACCGCCGTACCGTTTAGCGCCGATACACGTCTGTCCGGTGTGGATTATCAGGGC CATGTGTACCGCAAGGGCGCGGTGGATTCGCTGCTGGCCTTCATCAACATGCAGCGTAGCGACCTGCCGCCTGTCCTGGC GCGGGAAGTCGACAAGATTGCCAAGACCGGCGGCACGCCGCTGCTGGTCTGCGCCAACGGTCGTTTGCTGGGTGCGATTC ATCTCAAGGACGTGGTCAAGCCGGGTATTCGCGAGCGCTTCGAGGAGCTGCGCAAGCTGGGGATTCGCACGGTGATGGTG ACTGGCGACAACCCATTGACTGCCGCAGCCATCGCCGCTGAAGCGGGTGTCGATGATGTGCTGGCCGAAGCCACACCAGA GAAAAAGCTGGAGCGGATTCGTCAGGAGCAGGGCTAA Protein sequence : MSTTDFSRRDAVKTAEPQAASESAKTGIAALWRPALVQAFVKLDPRQLKRSPVMLVVELTAILTTVLCVIPNPQVPTSVC VQIALWLWFTVLFANFAEALAEGRGKARADSLKAGSEGLKARIRDENGSLRTINASELRKGDVVRVDAGEMIPGDGEVIE GIAAVNEAAITGESAPVIRESGGDRSAVTGNTRLVSDWLLIRISTNPGESTLDRMIALVEGAKRQKTPNEVALDILLIGL TLIFLLVVITLQPFAHFAGGSLPLVFLVALLVTLIPTTIGGLLSAIGIAGMDRLVRLNVIAKSGRAVEAAGDVHVLLLEK TGTITFGNRRCAAVYAAPGVTPKELGEGALLASLADDTAEGKSIVEFLRNLHPMNEPTLSSVTAVPFSADTRLSGVDYQG HVYRKGAVDSLLAFINMQRSDLPPVLAREVDKIAKTGGTPLLVCANGRLLGAIHLKDVVKPGIRERFEELRKLGIRTVMV TGDNPLTAAAIAAEAGVDDVLAEATPEKKLERIRQEQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 1e-99 | 56 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 8e-100 | 56 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 5e-82 | 50 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 2e-80 | 50 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-80 | 50 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-80 | 50 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-80 | 50 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-80 | 50 |
