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Name : rph (PSPPH_0201) Accession : YP_272506.2 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : 2.7.7.56 Position : 238839 - 239561 bp Length : 723 bp Strand : + Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : ATGAAACGTCCAAGTGGTCGCGCCGCCGATCAGCTCCGCTCGATCCGCATCACCCGCAACTACACCAAACACGCCGAGGG TTCTGTACTGGTCGAGTTTGGTGATACCAAGGTGATCTGCACCGTCAGCGTCGAAAACGGCGTACCACGCTTCCTCAAGG GGCAGGGCCAGGGTTGGCTGACTGCCGAGTACGGCATGCTGCCGCGCGCGACCGGCGAGCGTAACCAGCGTGAAGCCAGT CGCGGCAAGCAGGGTGGTCGTACACTCGAAATCCAGCGCCTGATCGGTCGTTCGCTGCGCGCTGCGCTGGACATGTCCAA GCTGGGCGACGTGACCCTGTACGTCGATTGCGATGTCATTCAAGCGGACGGCGGCACTCGCACCGCGTCCATCACCGGCG CAATGGTTGCTCTGGCAGATGCGCTGAAGGTGATCAAGAAGCGCGGCGGCCTGAAAGGCGGCGACCCGCTCAAGCAGATG ATCGCGGCCGTTTCGGTCGGCATGTACCAGGGTGAGCCAGTGCTCGACCTGGACTACCCCGAAGACTCGGCTGCCGAAAC CGACCTGAACGTGGTCATGACCAGTGCAGGCGGCTTCATTGAAGTACAGGGCACAGCCGAAGGCGCACCGTTCCAGCCTG AAGAGCTGAACGCGATGCTCGCCCTGGCGCAGAAAGGCATGACCGAGCTGTTTGAATTGCAGCGCGCCGCGTTGGCCGAC TGA Protein sequence : MKRPSGRAADQLRSIRITRNYTKHAEGSVLVEFGDTKVICTVSVENGVPRFLKGQGQGWLTAEYGMLPRATGERNQREAS RGKQGGRTLEIQRLIGRSLRAALDMSKLGDVTLYVDCDVIQADGGTRTASITGAMVALADALKVIKKRGGLKGGDPLKQM IAAVSVGMYQGEPVLDLDYPEDSAAETDLNVVMTSAGGFIEVQGTAEGAPFQPEELNAMLALAQKGMTELFELQRAALAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 9e-65 | 61 |
