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Name : PSPPH_1704 (PSPPH_1704) Accession : YP_273941.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 1970277 - 1971887 bp Length : 1611 bp Strand : - Note : identified by match to protein family HMM PF00005 DNA sequence : ATGAGCAATGACAATCTGATCGAAATCCGCGATCTGGCGGTCGAGTTCGTGACGGGCGACTCACGGCAACGGGTGGTCGA GAACATCAGTTTTGACATCCGTCGGGGTGAAACCCTCGCACTGGTCGGCGAAAGCGGCTCGGGCAAATCGGTTACAGCGC ATTCGATCCTGCGCCTGCTGCCCTACCCCATTGCCAGTCATCCGAGCGGCACTATCCGCTACGGCGGTGAAGACCTGCTG AAAGTGGAAGAGAAAAAGCTGCGCTCGATCCGTGGCAACCGTATCGCCATGATCTTCCAGGAACCGATGACTTCGCTGAA CCCACTGCACTCGGTCGAAAAACAAATCAACGAGGTACTGGGCCTGCACAAGGGCCTGACCGGCAAGGATGCCACCAAAC GCACGCTGGAGCTTCTTGAGCTGGTCGGCATACCTGAGCCACACAAACAGCTCAAAGCCTTGCCACACGAGCTGTCAGGC GGCCAACGCCAGCGTGTAATGATAGCGATGGCACTGGCCAACGAGCCGGAGCTGCTGATTGCCGACGAACCGACCACTGC ACTGGACGTCACGGTACAGCTGAAAATTCTTGAGTTGCTCAAGCAACTGCAGGCTCGTCTGGGCATGGCATTGCTGCTTA TCAGCCACGATTTGAACGTGGTAAGGCAAATAGCCAACCGAGTATGTGTCATGCAGCGCGGTTGCATCGTCGAACAGGCA TCGTGCGAAGAATTGTTCCGTTCGCCGCAACACCCTTACACCAAAGTGTTGCTCAGCGCAGAGCCCAGCGGCGGTCCTTC GACCAACCCGGCCGGCGCCCCGCTGCTTGAAGTCGAGGACCTGAAAGTCTGGTTCCCGATCAAAAAGGGCCTGCTCAAGC GCACGGTCGACCACGTCAAGGCGGTGGACGGCATACGCTTCAGCCTGCCGCGAGGGCAAACACTGGGCATCGTGGGTGAA AGCGGGTCGGGCAAATCGACGCTGGGGCTGGCGATTCTTCGGCTGATCGGCAGCCAGGGCACCATACGTTTCAAGGGCAA CGCGCTAGAATCTCTGTCGCAACAGCAGATCCGTCCGCTGCGCAGGCAGATGCAGGTGGTGTTCCAGGACCCGTTTGGTA GTTTGAGCCCGCGTATGTCAGTGGGTGAAATCGTTGGCGAAGGCTTGCGAATCCATGGCATGGGCACGGCCGCCGAGCAA CAGACGGCGATCATCGAAGCACTCAGGGAGGTTGGCCTGGATCCGGATACCCGGCACCGCTACCCTCACGAGTTCTCCGG TGGCCAACGGCAGAGGATCGCCATTGCACGTGCGCTGGTATTGAAACCGGCGCTTATCTTGCTGGACGAGCCGACGTCAG CCCTCGACCGGACCGTACAGCGTCAGGTCGTCGAGCTGCTTCGCTCGCTGCAAGCCAAGTACAATCTGACGTATTTGTTC ATCAGCCATGACCTGGCTGTCGTCAAAGCGCTAAGCCACCAGCTGATGGTGGTCAAGCAAGGCCAAGTGGTCGAACAGGG TGCAGCGCAGGACATCTTCGCCGCACCGCAACATCCTTATACACAGCAGCTGCTGGAAGCCGCCTTTTTGGCGCCGGTAG CTGTCGATTAA Protein sequence : MSNDNLIEIRDLAVEFVTGDSRQRVVENISFDIRRGETLALVGESGSGKSVTAHSILRLLPYPIASHPSGTIRYGGEDLL KVEEKKLRSIRGNRIAMIFQEPMTSLNPLHSVEKQINEVLGLHKGLTGKDATKRTLELLELVGIPEPHKQLKALPHELSG GQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILELLKQLQARLGMALLLISHDLNVVRQIANRVCVMQRGCIVEQA SCEELFRSPQHPYTKVLLSAEPSGGPSTNPAGAPLLEVEDLKVWFPIKKGLLKRTVDHVKAVDGIRFSLPRGQTLGIVGE SGSGKSTLGLAILRLIGSQGTIRFKGNALESLSQQQIRPLRRQMQVVFQDPFGSLSPRMSVGEIVGEGLRIHGMGTAAEQ QTAIIEALREVGLDPDTRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQAKYNLTYLF ISHDLAVVKALSHQLMVVKQGQVVEQGAAQDIFAAPQHPYTQQLLEAAFLAPVAVD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 7e-78 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 7e-78 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 7e-78 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 7e-78 | 42 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 1e-95 | 41 |
