Gene Information

Name : PSPPH_0162 (PSPPH_0162)
Accession : YP_272470.1
Strain : Pseudomonas syringae 1448A
Genome accession: NC_005773
Putative virulence/resistance : Unknown
Product : ISPsy20, transposase IstB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 187305 - 188108 bp
Length : 804 bp
Strand : -
Note : identified by similarity to GB:BAC55320.2; match to protein family HMM PF01695

DNA sequence :
ATGCGTGACCTAATGACTGAACTCAAAGAACTGCGCCTGCACGGCATGGCCAGTGCTTGGGAAGAACTGGTCTCTCAAGG
AACAGCGTCGACGGCTTCATCGAAATGGCTGCTGGAACATCTGCTTCAGCAGGAACATGCGGATCGCGCGGTGCGCTCGG
TGAATCATCAGATGAACATGGCAAAACTCCCCATGCACCGTGACTTAGCTGGCTTTGACTTCAGCGCTTCCAGCGCTGAT
GCCCGGCTGGTCAGCGATCTATCCAGCTTGGCGTTCACTGAAACCGCGCAGAATGTCGTGTTCATCGGCGGCCCTGGCAC
CGGGAAAACACACCTGGCCAGTGCCTTGGCTGTATCCGGAATCACGGCCTACAACAAACGCGTGCGCTTCTTTTCCACGG
TGGATCTGGTGAATCTGCTGGAGCGTGAGAAGTACGATGGCAAGGCAGGGCGAATCGCCCAGGCACTGCTGCGCACAGAC
CTGGTGATACTGAATGAACTCGGATATTTGCCCTTCAGCCAAAGCGGTGGCGCCCTGTTATTTCACCTGCTGTCCAAACT
GTACGAACACACCAGCGTGGTCATCACCACCAACCTGAGCTTCTCGGAATGGTCGAGTGTGTTTGGCGACGCCAAGATGA
CCACCGCGTTGCTGGATCGGCTGACACACCACTGCCACATCGTCGAAACGGGCAACGAGTCCTACCGCCTACAACACAGC
ACATTGGCTGCCCAGACAAAGATCAAAACACGCGAACGAAAGCGAAAGGACGGAAATGATATCGAGGACGATGAGCCATT
TTGA

Protein sequence :
MRDLMTELKELRLHGMASAWEELVSQGTASTASSKWLLEHLLQQEHADRAVRSVNHQMNMAKLPMHRDLAGFDFSASSAD
ARLVSDLSSLAFTETAQNVVFIGGPGTGKTHLASALAVSGITAYNKRVRFFSTVDLVNLLEREKYDGKAGRIAQALLRTD
LVILNELGYLPFSQSGGALLFHLLSKLYEHTSVVITTNLSFSEWSSVFGDAKMTTALLDRLTHHCHIVETGNESYRLQHS
TLAAQTKIKTRERKRKDGNDIEDDEPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EC042_4097 YP_006098380.1 putative transposase Not tested Tn2411 Protein 6e-65 62
istB AAN62229.1 putative NTP-binding protein of insertion sequence Not tested PAGI-3(SG) Protein 9e-61 57