Gene Information

Name : PSPPH_1513 (PSPPH_1513)
Accession : YP_273767.1
Strain : Pseudomonas syringae 1448A
Genome accession: NC_005773
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1758699 - 1759367 bp
Length : 669 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGCTGCAAGTGCGAAACGTATTCAAGCGCTACACCACGGCACAGGGACCGCTGGATGTCTTGCGTGGTGTCGATCTGCA
TCTGGCACAGGGCGAAAGCCTGGCGTTGATGGGTGAGTCCGGCAGTGGCAAGAGCACCTTGCTGCATTTGGTGGCGGGCC
TGGATCAGGTCGACGATGGCAGCATCGAGGTTGCAGGCCAGCGTCTGGACCTGATGAACGAAAGCCAGCTGGCCAACTGG
CGGCGTACCGAGATCGGTCTGGTGTTTCAGCAGTTCAACCTGATCGGCAGCCTGAAGATAGCCGACAACCTGGCGTTTCA
GGCACGGCTGGCCGGGCGATTCGATGCGCTCTGGCAGACGCACCTGATCGAGCGTCTGGGGCTGGGCACGCTGCTGAATC
GCTATCCCGAGCAACTGTCCGGCGGACAACAGCAGCGGGTAGCGATAGGTCGCGCCCTTGCTTCACGGCCCAGCCTGCTG
CTGGCTGACGAGCCCACCGGCAATCTCGACGAGACCACCAGCGACGAAGTGCTGCAATTGTTGCTGGATGTGCTCGCCGA
CAGCCCCACTAGCCTGCTGATGGTCACCCACAGCCCGCGGGTCGCTGACCGGCTGGCGCGCAAAGTGGTGCTGCATCTCG
GTCGTCTGGCTGTCGAAGGCGAGCGCTGA

Protein sequence : 
MLQVRNVFKRYTTAQGPLDVLRGVDLHLAQGESLALMGESGSGKSTLLHLVAGLDQVDDGSIEVAGQRLDLMNESQLANW
RRTEIGLVFQQFNLIGSLKIADNLAFQARLAGRFDALWQTHLIERLGLGTLLNRYPEQLSGGQQQRVAIGRALASRPSLL
LADEPTGNLDETTSDEVLQLLLDVLADSPTSLLMVTHSPRVADRLARKVVLHLGRLAVEGER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-29 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-29 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-29 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPPH_1513 YP_273767.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-24 43
PSPPH_1513 YP_273767.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-29 42