Gene Information

Name : PSPPH_0134 (PSPPH_0134)
Accession : YP_272444.1
Strain : Pseudomonas syringae 1448A
Genome accession: NC_005773
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 158397 - 158930 bp
Length : 534 bp
Strand : -
Note : identified by similarity to GB:AAN68708.1; match to protein family HMM PF05591

DNA sequence :
ATGGCGAAGAAGGAAAGTACCCAGCACAAACTTGACCGCGTTCGCGCGCCTCGGGTCCATATCACTTACGACGTTGATAT
CGGCGACGCTCAGGAAAAGAAAGAGCTGCCATTCGTTGTAGGCGTTCTCGGCGATTTCTCCGGCAACCCCCTGGAGCCGC
TGCCCAAGCTCAAGGATCGCAAGTTCATCTTCATCGATCGCGACAACTTCAACGGCGTCCTTAAAGGCATCAAGCCGCGC
CTGGCGTATCGCGTCGACAACACCCTGGCCAAGAACGGTACTCAGCTTGGCGTCGAATTGAACTTCAATGCACTGGAAGA
CTTCGAGCCGCAGAACGTCGTGCGTCAGGTCGAGCCGCTGCGCAAGCTGCTGGAAGTGCGCAACAAGCTGGCTGACCTGC
GTAACAAGATGGGTGGCAACGACAAGCTTGAAGAACTGCTGATGGACGTGTTGCAGAACACTGAAAAGCTGAAAACCCTG
GGCAAGGAGTTCGGCCGTGAAGCCGCCGTTCCTGCCACCGACAGCAAAGAGTAA

Protein sequence :
MAKKESTQHKLDRVRAPRVHITYDVDIGDAQEKKELPFVVGVLGDFSGNPLEPLPKLKDRKFIFIDRDNFNGVLKGIKPR
LAYRVDNTLAKNGTQLGVELNFNALEDFEPQNVVRQVEPLRKLLEVRNKLADLRNKMGGNDKLEELLMDVLQNTEKLKTL
GKEFGREAAVPATDSKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0297 NP_454879.1 conserved hypothetical protein Not tested SPI-6 Protein 1e-31 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSPPH_0134 YP_272444.1 hypothetical protein VFG2069 Protein 6e-32 43