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Name : hrpJ (PSPPH_1293) Accession : YP_273552.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Virulence Product : type III secretion component protein HrcJ Function : - COG functional category : - COG ID : - EC number : - Position : 1504312 - 1505418 bp Length : 1107 bp Strand : - Note : identified by match to protein family HMM PF07201; match to protein family HMM TIGR02511; match to protein family HMM TIGR02568 DNA sequence : ATGAAAATCGTCGCCCCGCCTATATTGCCAACCCACACGGTCACGCCGATTCGCGCCGTCACGCCCGCTGCGCGAGCGAT TCCCGGGACCCTGTCGTCGGAAAAAGGCACGTCATCGCAACAGGTCTCGCGCTTCGCCGCAGCACTGGTGCGAAACAGCC GGATACTGCGCCAGCGCGAACTGATCGCAAGCAGAAATGCACTGCAATCACGGGCCGTCAAACTGGGTGAGCTCTATCAG TTGTTGATGAGCGCCAACGATACCGGTCTGGATAATGCCGCGAGGCTGCTGCGCAAAAAACTGCTGCAAGAGAACGACAC AGAACTGGAACAGGTTCTGGAATTTGCCGATGGCGATGCGGCCAAGGCCCACGTGGTGCTGCAAGCGGCGCGCAAACAGG CTGAGGAAGATGGAGCTGAAGGCGAGTACGTGGCGCTCACCCAAACGCTGAAACAGTTGCGACGCAAGTTCGGACCACAC GCCCGGGCAGGCATTAATACTGCCAGGGCGTTCGGGCGGCAGAACGTCGACAACAAACGCCGTACCGCGTTGCGCAACCT TTATGGCGTAGCGGTTTCCGGACAGCCAAACGTGACCGGCCTGATCGAAGCCTTGATCAACGAGCAGGAAGAGACCGGCG ACTTCGACCTCAACCTGCGCGACATGCGCAGAGCCATTGCCGACGATCTCTCGGCGATTACCCCTTCGGCATCTCATGAA CAGCTGCGCACGTTGATGCACGGGCTGACCACAGCACGGCACGTGACGACGTTGTTGCGCGGTTGTGAACACCTGCTTGG GCGCATGCGCAACAAGAACCCTGACCTGAAGGTGGATCCGCCAGCCTTTCTCAAACACTTGCTGACCCTGACGGCCAATG GAATGAACGTGAACCAGACCCTGCAACTGACTCAACACATCGGCGGTGCGAGGCTCAAGAACCAGCTGGCATTTCTCAAT GGCTTGCGGCCGATGCTGATGCAATTGCCCATCCTGCTCTGGAAGGACATGAAAAGCCGCCAGGCTGCGCTGAATAACCT GCTCACCCTGATGGCAGAACTGACTCAACAGGAACAGAAGCAGCTTTTTGAGGGGCTTGCCGGATGA Protein sequence : MKIVAPPILPTHTVTPIRAVTPAARAIPGTLSSEKGTSSQQVSRFAAALVRNSRILRQRELIASRNALQSRAVKLGELYQ LLMSANDTGLDNAARLLRKKLLQENDTELEQVLEFADGDAAKAHVVLQAARKQAEEDGAEGEYVALTQTLKQLRRKFGPH ARAGINTARAFGRQNVDNKRRTALRNLYGVAVSGQPNVTGLIEALINEQEETGDFDLNLRDMRRAIADDLSAITPSASHE QLRTLMHGLTTARHVTTLLRGCEHLLGRMRNKNPDLKVDPPAFLKHLLTLTANGMNVNQTLQLTQHIGGARLKNQLAFLN GLRPMLMQLPILLWKDMKSRQAALNNLLTLMAELTQQEQKQLFEGLAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpJ | ABQ88351.1 | HrpJ | Virulence | Hrp PAI | Protein | 5e-157 | 89 |
| hrpJ | AAT96138.1 | HrpJ | Virulence | T-PAI | Protein | 4e-142 | 83 |
| hrpJ | AAT96192.1 | HrpJ | Virulence | T-PAI | Protein | 2e-142 | 83 |
| hrpJ | NP_791230.1 | type III secretion protein HrpJ | Virulence | Hrp PAI | Protein | 3e-141 | 78 |
| hrpJ | AAG33876.1 | HrpJ | Virulence | Hrp PAI | Protein | 2e-141 | 78 |
| hrpJ | AAR25630.1 | type III secretion protein HrpJ | Not tested | Not named | Protein | 4e-84 | 52 |
