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Name : hrpQ (PSPPH_1291) Accession : YP_273550.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Virulence Product : type III secretion component protein HrpQ Function : - COG functional category : - COG ID : - EC number : - Position : 1501220 - 1502194 bp Length : 975 bp Strand : - Note : identified by match to protein family HMM TIGR02500 DNA sequence : ATGTTTGAATTACGCGTACTGAACGGTCAGCACCAAGGCGCAGCCTTGCCACTGGTGGGCGAGCAATGGTCGATTGGCTC TGCCGCGCAACACGATCTGGCACTGGACGACGCAGGAGTGGAAAGCCTGCATTGCCGCCTGCAACGCCTGGACGACAGCT GGACACTGAACGCTGAAGAAGGCGCGGTGTGCGACGAAGAAGGTAACGCCCGGCCCGGTATTGATCTGACACTCAACACT GCATTCTTGTTGGGCTCAGTGTGGCTGTGCGTTTCGCCCGCAGGCGATGAGTGGCCTTCAGTGCCAGCGGTCATCCCGAA ACAGCCACAGGCCGACCCCGAGCCTGTGCGCAATGATGTGCCGCTGAAAAAGGTCAAGTCGCGCTCGCAATTGCTCATCC GTACCACAGGGATCATCGCCGGCTTGCTGGTGGGCGTCATCGGCAGCGCCTGGAGCCTGACCCGCCCGCCCGCCATTGCA ATGTACCAAAGCCCCGGCCACATGGCCTCGGTCACAGCAGAGGCACCGGTAGAGACATCTCCTACACCGGCAAAGATCAT CAAACCCGTGGCCGATAAACGCATACGCCTGACCAGCGCGGATGCGGTACGCCATCAGTTGGGCACCATGCTCAGCGACC GGCTGCTGACCGATGTCAGCGTGGAAGAAACAGCCGAGGGGCTGGTGCTCAACGGCGATCTCAAAGAGGAATCCCTGCTG GTCTATCAACGCATGCTGCAGCGTTTCAAGGACCGCTATGAGTCGCCGGTGACGGTGTTCGACAACGTCGCCAGTACACG CAGCGCCCTGCCCTTTGTGGTGGTTCAGATCATGACCGGCCCGCATGCGCATCTGGTGACTGCAGACGGCCGCCGTATTT ATGTGGGTGACGAGGTGGATGGCTTGCGCCTGACGCGAATCGACAATCAGCGCCTGCAATTCGACGGCAATCGGCACATT GAGGTGAACTGGTGA Protein sequence : MFELRVLNGQHQGAALPLVGEQWSIGSAAQHDLALDDAGVESLHCRLQRLDDSWTLNAEEGAVCDEEGNARPGIDLTLNT AFLLGSVWLCVSPAGDEWPSVPAVIPKQPQADPEPVRNDVPLKKVKSRSQLLIRTTGIIAGLLVGVIGSAWSLTRPPAIA MYQSPGHMASVTAEAPVETSPTPAKIIKPVADKRIRLTSADAVRHQLGTMLSDRLLTDVSVEETAEGLVLNGDLKEESLL VYQRMLQRFKDRYESPVTVFDNVASTRSALPFVVVQIMTGPHAHLVTADGRRIYVGDEVDGLRLTRIDNQRLQFDGNRHI EVNW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpJ3 | AAA81941.1 | HrpJ3 | Virulence | Hrp PAI | Protein | 1e-126 | 84 |
| hrpQ | ABQ88353.1 | HrpQ | Virulence | Hrp PAI | Protein | 1e-126 | 84 |
| hrpQ | NP_791228.1 | type III secretion protein HrpQ | Virulence | Hrp PAI | Protein | 1e-120 | 79 |
| hrpQ | AAG33878.1 | HrpQ | Virulence | Hrp PAI | Protein | 8e-121 | 79 |
| hrpQ | AAT96194.1 | HrpQ | Virulence | T-PAI | Protein | 1e-110 | 72 |
| hrpQ | AAT96140.1 | HrpQ | Virulence | T-PAI | Protein | 8e-110 | 71 |
| hrpQ | AAR25632.1 | type III secretion protein HrpQ | Not tested | Not named | Protein | 3e-65 | 47 |
