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Name : hrpF (PSPPH_1278) Accession : YP_273537.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Virulence Product : type III secretion component protein HrpF Function : - COG functional category : - COG ID : - EC number : - Position : 1491471 - 1491695 bp Length : 225 bp Strand : + Note : identified by match to protein family HMM PF06266 DNA sequence : ATGATAAGTTTCAAATCTCTGCAAAATAACCTCGACAGCACGCTGAATCGCGCCTTGTCCGACGTGGATGACGTGCTTGA GGGTGGCAACGGACATTTCACTGCCGATGACATTGATGCCTTCGGTGAGGCAAGTCAGCAAGCCGCTGTCAGTTCCAACA TCGCTGACCAGTGCCAGCAAGCCGGCTACAAAATGACCAAAAATGTCATCGATGGATTTCAGTGA Protein sequence : MISFKSLQNNLDSTLNRALSDVDDVLEGGNGHFTADDIDAFGEASQQAAVSSNIADQCQQAGYKMTKNVIDGFQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpF | AAC35804.1 | HrpF | Virulence | Hrp PAI | Protein | 1e-27 | 100 |
| hrpF | AAB05083.1 | HrpF | Virulence | Hrp PAI | Protein | 6e-27 | 95 |
| hrpF | AAT96154.1 | HrpF | Virulence | T-PAI | Protein | 8e-23 | 80 |
| hrpF | AAT96208.1 | HrpF | Virulence | T-PAI | Protein | 8e-23 | 80 |
