|
Name : hrpE (PSPPH_1277) Accession : YP_273536.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Virulence Product : type III secretion component protein HrpE Function : - COG functional category : - COG ID : - EC number : - Position : 1490806 - 1491387 bp Length : 582 bp Strand : + Note : identified by match to protein family HMM PF06188; match to protein family HMM TIGR02499 DNA sequence : ATGCTCGCCAAACGCAGTATTACGCTGACTGCCACTGCGCTTCTGCCTGAACCTGTGCTGCGTCGTGAAGACATTGCCAA CAGCCTGCTGGCTCGTGATGTTCTAGCCGACGCGCAGCGCCAGGCAGAGCAAATGCTGGTTCTCGAACAACAGAAGGCCG ACCTTGTGCATCAGCAGGCGCTGGCCAGCTTCTGGGAAAACGCCAATGCGTTCCTCGCTGAACTGCAGGTGCAGCGTGAA GTGTTACAGCAGCAAGCAATGGCTGCCGTAGAGGAATTGCTCAGCGAGTCGCTTCGGCACCTGCTTGACGACACGACGCT GGCCGAGCGCGCCAGGGCACTGGTGAAAAATCTCGCGGCCAGTCAGCTCAACGAAGCGGTGGCGACCCTCAGCGTTCATC CCGACATGGCCGAGCCGGTCGCCGAGTGGCTGGCTGACAGCCGGTTTGCCCAATACTGGCAGCTTAAGCGCGACGCATCG CTGACCACCGAACGCCTGCGTCTGAGCGATGCCAATGGCGCGTTCGACATCGATTGGGCGACGCTGCGCAACGGGCTGGC AGGCCGTGACTCGTCTGCCTGA Protein sequence : MLAKRSITLTATALLPEPVLRREDIANSLLARDVLADAQRQAEQMLVLEQQKADLVHQQALASFWENANAFLAELQVQRE VLQQQAMAAVEELLSESLRHLLDDTTLAERARALVKNLAASQLNEAVATLSVHPDMAEPVAEWLADSRFAQYWQLKRDAS LTTERLRLSDANGAFDIDWATLRNGLAGRDSSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpE | AAC35803.1 | putative hrp type III secretion pathway protein | Virulence | Hrp PAI | Protein | 2e-66 | 97 |
| hrpE | AAB05082.1 | HrpE | Virulence | Hrp PAI | Protein | 2e-58 | 83 |
| hrpE | AAB00131.1 | HrpE | Virulence | Hrp PAI | Protein | 3e-50 | 78 |
| hrpE | NP_791213.1 | type III secretion protein HrpE | Virulence | Hrp PAI | Protein | 2e-49 | 77 |
| hrpE | AAT96209.1 | HrpE | Virulence | T-PAI | Protein | 7e-45 | 70 |
| hrpE | AAT96155.1 | HrpE | Virulence | T-PAI | Protein | 2e-45 | 70 |
