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Name : hrpB (PSPPH_1274) Accession : YP_273533.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Virulence Product : type III secretion component protein HrpB Function : - COG functional category : - COG ID : - EC number : - Position : 1489054 - 1489428 bp Length : 375 bp Strand : + Note : identified by match to protein family HMM TIGR02497 DNA sequence : GTGACCGTTTCCCACCTTGGTAATGTTAAAAACATCTCGCCGGAACTTGGGCAGGATGTGCCACAAGGGCTCGTTTCAGA ACCTCCCCAGGCGGATGTCGATATCTTCACCGCCGCAACGCGCCCGGATAATGTTTCAAGCGGTGCACCGCTTTCCGAGC ATATCGCCAGCGCGATTTCCGGCGGTCTGGGCGAAACCGAAAAAATGTCCCAGCAAGCCATGCGCTCCATGAAAAAGGCC TCGGGCAGCGGAGAGGCACTGGATATCGCGGCGATGACTCGCACATTGTCGCAATGCTCGCTGCAGACAGCGCTCACGAC CAAAGTCGTCAGCAAGACTGCGCAGGCAATCGACAAGCTGACCAACCTGCAGTAG Protein sequence : MTVSHLGNVKNISPELGQDVPQGLVSEPPQADVDIFTAATRPDNVSSGAPLSEHIASAISGGLGETEKMSQQAMRSMKKA SGSGEALDIAAMTRTLSQCSLQTALTTKVVSKTAQAIDKLTNLQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpB | AAB00137.1 | - | Virulence | Hrp PAI | Protein | 8e-53 | 100 |
| hrpB | AAB05079.2 | HrpB | Virulence | Hrp PAI | Protein | 2e-50 | 94 |
| hrpB | AAT96212.1 | HrpB | Virulence | T-PAI | Protein | 5e-46 | 84 |
| hrpB | AAT96158.1 | HrpB | Virulence | T-PAI | Protein | 5e-46 | 84 |
| hrpB | NP_791210.1 | type III secretion protein HrpB | Virulence | Hrp PAI | Protein | 2e-34 | 65 |
| hrpB | AAB00128.1 | HrpB | Virulence | Hrp PAI | Protein | 2e-34 | 65 |
