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Name : hopAA1 (PSPPH_1263) Accession : - Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Virulence Product : - Function : - COG functional category : - COG ID : - EC number : - Position : 1471478 - 1472897 bp Length : 1420 bp Strand : + Note : PSPPH1263; type III effector HopAA1, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to GB:AAO33453.1 DNA sequence : ATGGAGAGCTTTCGAACCGCGTCTGACGCGTCTCTTGCTTCCAGTTCTGTGCGGTCCGTCAGCTCCGGTGCGCAGAACAA TCTGCATGCGATTACTGATTACCTGAAGGATCATGTGTTCGCTGCACACAAATTGCCGTTGACCGACTCATTGGAGGACC ACGCTGCCATTCATGCTCATAACGAGCAGATCGATGCGCTGATCGATGCGCGCGCCAGGCGTTTGAGCGAGCAGGGCGAA CCCCGTGCAAGCATCGGAGAAACATTTGCCAAGGCGGAAAAGTTCGACCGATTGGCGACTACGGCATCAAGCGCGTTACG GGCCACGCCATTTGCCGCAGCTTCGGTGCTTCAGTACATGCAACCGGCGATTAACAAGGGCGATTGGCTACCTGCTCCAC TCAAGCCGCTAACCCCGTTTATTTCCGGGGCGCTGTCGGGAGCGATGGACCAGGTGGGCACCAAGATGATGGATCGCGCG ACGGGTGATCTGCGTTATCTGAGCACCTCGCCGGACAGGCATCCATGATGCGATGGCTACTTCCGTGAAACGCCACTCGC CAGGGCTTGGCAGGCAGGTTGTGGACATGGGGATTGCGGTGCAAACGTACTCGGCGCGCAACGCAGTACGCACGGTATTG GCGCCGGCACTGGCGTCCAGACCAGCAGTCCAGAGTGCTGTTGACATCAGCGTGTCGACGGCGGGTGGTCTGGCTGCCAA CGCAGGCTTTGGCAACCGCATGCTCAGTGTGCAGTCGCGCGATCACCTGCGTGGTGGTGCATTCGTGCTCGGCCTGAAGG ATAAAGAGCCCAAGGCTGACCTGAATGAAGAAACCGACTGGCTCGATGCTTACAACGCGATCAAGTCGGCCAGCTACTCA GGTGCGGCGCTTAACGCTGGCAAGCGGATGGCCGGCCTGCCACTGGACATCGCGACTGACGGGCTCAAGGCGGTGAGAAG TCTGGTCTCGGCAACCAGTCTGGTACAAAACGGTGTTGCCTTGGCGGGCGGTTTCGCAGGGGTAGGCAAGTTGCAGGAAA TGGCGACGAAAAACATTACCCATCCGGCGACCAGTGCTGCGGTCAGTCAGTTGACCAACCTGGCGGGTTCGGCAGGCGTT TTCGCAGGCTGGACCACCGCTGCACTGGCGACTGACCCTGCGGTTAAAAAAGCCGAGTCGTTCATACAGGACACGGTGAA GTCGACTGCGTCCAGTACGACAGGCTATGTAGCCGACCAGACCGTAAAACTGGCGAAAACCGTCAAAGACAAAGGCGGGG AAGCGCTCGTCAATACCGGTGCCAGCTTGCGCAACACGGTCAATAACCTGCGTCATCGTCCCGCTCGTGAAGCGGATATC GAAGAGGGTGGTATTGCGGCTTCTCCAAGTGAAACACCGTTTCAGCCTGGGCGGTCGTAA Protein sequence : - |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hopAA1-1 | NP_791199.1 | type III effector HopAA1-1 | Virulence | Hrp PAI | DNA | 0.0 | 85.2 |
| unnamed | AAF71504.1 | unknown | Not tested | Hrp PAI | DNA | 0.0 | 85.2 |
| hopPtoA2 | AAO33453.1 | Hrp-dependent outer protein A2 | Not tested | Not named | DNA | 0.0 | 83 |
