Gene Information

Name : PSPPH_1235 (PSPPH_1235)
Accession : YP_273500.1
Strain : Pseudomonas syringae 1448A
Genome accession: NC_005773
Putative virulence/resistance : Unknown
Product : isochorismatase
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG1335
EC number : -
Position : 1441955 - 1442632 bp
Length : 678 bp
Strand : -
Note : identified by match to protein family HMM PF00857

DNA sequence :
ATGATCAGCGTCAATGCGCGTCCGGACTGTTTCACGTTCGCCCCCTCCTGTGCCGCTGTGGTGATCATCGACATGCAGCG
CGATTTCCTCGAACCCGGCGGCTTTGGTGCCGCGCTGGGCAACGATGTCGTACCGTTGCAGGCCATCGTGCCATCGGTGC
AACAACTGCTGGCGCTGGCCCGTGATCAGAGCATCACGGTGATACACACTCGTGAATCGCACAGCGCGGACCTTGCCAAC
TGCCCGCACGCCAAGCTGGCCCACGGCTCACCAGGCCTGCGCATCGGCGACTCTGGCCCGATGGGCCGCATCCTGATTCG
CGGCGAACCCGGCAATCAGATTATCGACAGCCTGACGCCGCTCGCCTGCGAGTGGGTCATCGACAAACCCGGCAAGGGCA
TGTTCTTCGCCACCGACCTGCATCAGCGGCTGACCGATGCTGGCATCACGCATTTGATCTTCGCAGGCGTTACCACCGAA
GTCTGCGTGCAGACCAGCATGCGCGAAGCCAGTGATCGGGGTTATCGCTGCCTGCTGATCGAGGATGCGACCGAAAGCTA
TTTCCCAACCTTCAAACAAGCCACTCTGGACATGATCACCGCACAAAACGCGATTGTCGGGCGTGCAGCGTCGCTGGCCG
ATCTGCAACAGGCCCTGCAAACAAGGAGTACACACTGA

Protein sequence :
MISVNARPDCFTFAPSCAAVVIIDMQRDFLEPGGFGAALGNDVVPLQAIVPSVQQLLALARDQSITVIHTRESHSADLAN
CPHAKLAHGSPGLRIGDSGPMGRILIRGEPGNQIIDSLTPLACEWVIDKPGKGMFFATDLHQRLTDAGITHLIFAGVTTE
VCVQTSMREASDRGYRCLLIEDATESYFPTFKQATLDMITAQNAIVGRAASLADLQQALQTRSTH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_2632 YP_859426.1 isochorismatase hydrolase Not tested Not named Protein 3e-45 57