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Name : ndpA (PSPPH_1145) Accession : YP_273413.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Unknown Product : nucleoid-associated protein NdpA Function : - COG functional category : R : General function prediction only COG ID : COG3081 EC number : - Position : 1344087 - 1345088 bp Length : 1002 bp Strand : + Note : identified by similarity to SP:P33920; match to protein family HMM PF04245 DNA sequence : ATGCCTATCCGTCATTGCATTGTTCATCTGATCGACAAAAAACCTGACGGCACACCAGCAGTTCTCCACGCCCGCGACTC CGAGCTTGCCGAGTCGGCCGCCATCGAGAACCTGCTGGCTGACCTCAACGACAGCTACAACGCCAAACAAGGCAAGGCCT GGGGGTTCTTCCATGCCGAGTCCGGCGCTTACCCGTTCAGCGGCTGGTTGAAAGAGTATTTCGACGGTAGTCAGGATTTC ACTAGCTTCAGCCGCGTGGCCATAAAGCATTTGCAGACGCTCATGGAGGCATCCAACCTCTCCACCGGCGGCCATGTGCT GTTCGCCCACTACCAGCAAGGCATGACCGAATATCTCGCCATCGCCCTGCTGCACCACAGCGAAGGCGTGGCGGTGAACG CCGAACTGGACGTGACCCCGTCGCGCCACTTGGACCTCGGCCAGTTGCACCTCGCGGCGCGGATCAACCTGTCGGAGTGG AAGAACAACCAGAACTCCAAGCAGTACATCTCGTTCATCAAGGGCAAGAACGGCAAGAAGGTCTCAGAGTACTTCCGCGA CTTCATCGGTTGTCAGGAGGGAGTCGACGGCCCGGGCGAGACCCGTACTCTGTTGAAGGCCTTCAGTGACTACGTCGAAA AAGAGGACCTTCCAGAGGAGTCCGCACGGGAGAAGACCCAGACCCTGGTCGATTACGCCACCGCGCAGACCAAGCTTGGC GAGCCGGTGACTCTCGAAGAGCTCTCTAGCCTGATTGACGAGGACCGCCCAAAGGCGTTCTACGATCACATCCGAAACAG TGACTATGGTTTGTCGCCAGAGATTCCGGCCGACAAACGCACCCTGAACCAGTTTCGCCGCTTCACCGGGCGGGCCGAAG GGCTGTCGATCAGCTTCGAGGCGCACTTACTAGGCGAAAAGATCGAATACGACGAAGCCGCCGGTACCTTGATCATTAAA GGCTTGCCAACTCAACTCATTGATCAGTTAAAACGCCGCTGA Protein sequence : MPIRHCIVHLIDKKPDGTPAVLHARDSELAESAAIENLLADLNDSYNAKQGKAWGFFHAESGAYPFSGWLKEYFDGSQDF TSFSRVAIKHLQTLMEASNLSTGGHVLFAHYQQGMTEYLAIALLHHSEGVAVNAELDVTPSRHLDLGQLHLAARINLSEW KNNQNSKQYISFIKGKNGKKVSEYFRDFIGCQEGVDGPGETRTLLKAFSDYVEKEDLPEESAREKTQTLVDYATAQTKLG EPVTLEELSSLIDEDRPKAFYDHIRNSDYGLSPEIPADKRTLNQFRRFTGRAEGLSISFEAHLLGEKIEYDEAAGTLIIK GLPTQLIDQLKRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| RL104 | AAP84229.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 2e-133 | 80 |
