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Name : PSPPH_0107 (PSPPH_0107) Accession : YP_272418.1 Strain : Pseudomonas syringae 1448A Genome accession: NC_005773 Putative virulence/resistance : Virulence Product : type I restriction-modification system DNA methylase Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : - Position : 123215 - 125620 bp Length : 2406 bp Strand : - Note : identified by match to protein family HMM PF02384; match to protein family HMM PF02506 DNA sequence : TTGAACCACGCGGTCCACAACAAACTGGTTTCGTTTATCTGGTCAATTGCCGACGACTGCCTGCGTGACGTCTATGTGCG CGGCAAGTACCGCGACGTCATCCTGCCCATGGTCGTACTGCGCCGGCTGGATGCCCTTCTGGAGCCGAGCAAAGCCAAGG TTATGGAAGAGCTGGCCTTTCAGCAGGGGGAAATGAGCCAGACCGAGCTGGATGACAGCGCCCTGCGCTCCGCTTCCGGC TACGTCTTCTACAATACCAGCAAGTGGACGCTGAGCCAGCTGCAGAAGACAGCCACCAACAACCAGCAGATCCTCCTGAA CAACGTTGAGGAATACCTCGACGGTTTCAGCGATAACGTTAAGGACATCGTCCGGCGCTTCAACCTCAAGTCGCAGATGC GCCACATGGCCAGCAAGGACGTGCTGCTGGACGTGCTGGAAAAATTCACCTCGCCCTACGTCAACTTGACCCCGACGGAT ATCGAGGATCCAGAAGGCAACCGTCTGCCTGCCCTGAGCAATCTAGGAATGGGCTATGTTTTTGAAGAGTTGATCCGCAA GTTCAACGAAGAGAACAATGAAGAAGCCGGCGAGCACTTCACCCCGCGTGAGGTGATCGAGCTGATGACTCACCTGGTAT TCGACCCGATCAAGGATAGCCTGCCCCCGGTCATGACCATCTACGACCCTGCCTGCGGCAGCGGCGGCATGCTTACCGAG TCGCAGAACTTTATCGAAGAGAAATACCCGGATCCTACCACCCAGCGTGACATCCACCTGTACGGCAAGGAAATCAACGA CGAGACCTACGCCATCTGCAAGTCGGACATGATGATCAAAGGCAATAACCCCGCCCACATCCGTCCCGGCTCCACCTTGT CGGTGGACGAGTTCGCCGGCAGCCGTTTCGACTTTATGCTGTCCAACCCCCCCTACGGCAAGAGCTGGGCCAGCGAGCAG AAGTTCATTAAAGACTGCGGCGAGGTGATTGACCCTCGCTTCAAGGTCAGCCTCAGGGACTACTGGGACAACCCAGAGAT GCAGGACGCCACCCCGCGCTCCAGCGACGGCCAGCTGCTGTTTCTGATGGAAATGGTCAACAAGATGAAGGCCTCGGGCG AGGGTAGCCTAGGCTCGCGCATCGCCTCGGTGCACAACGGCTCCAGCCTGTTTACCGGCGACGCCGGGAGTGGCGAGAGC AATATCCGCCGCCACCTGATCGAAAACGACCTGCTCGACGCCATCATCCAGTTGCCCAACAACCTGTTCTACAACACTGG CATCACCACCTATATCTGGCTGCTCTCCAGCAACAAGCCGGTGCAGCGCCGTGGCAAGGTGCAACTGATCGACGCCAGCC TGCTGTACCGCAAACTGCGTAAGAACCTCGGTAACAAGAACTGCGAATTTGCCCCCGAACATATCGAGCTGATTACCCAA ACCTACCTCGACCTCGCCAGCCTTGACCGCCCGGCCGGTGGCGACGGCATTGCCGCCCAAGTGTTCGACAACCGCGACTT CGGCTACCACAAGGTCAGCATCGAACGGCCAGACCGGCGCAAGGCGCAGTTCAGCGCCGAGCGCATTGAAACCCTGCGCT TCGACAAAGCCCTGCGCGAACCCATGCAATGGATCTACCAGCAGTGGGGCGAAGCGCTGTACCAGGATGAAGCCCTGGCC ACGCACGAAAAAGCCATCCTCGCCTGGTGCGAAGAACAAGGCTTGGAGCTCAACATCAAACAACGCAAGAAGTTGCTGAA CCTGGAAACCTGGGCCAAGCAAGCGCTGCTGGTGACCGTGGCCAACTACTTGATGCAGGCCATCGGCAGCGACGAATACG ACGACTTCAACCTGTTCGCCAAGCTGGTGGACAAGGTGCTCAAACAACTAAACAAAGAGGTCGGCATCAAGCTCGGTGCC AGCGAGCGCAACCAAGTGCTCAACGCCGTCAGCTGGTACGACGAAAACGCCGTCAAGGTGCTGCGCAAGGTAGAGAAATT CGACCGCGCCGAGTTGGCCGCCCTGCTTGAGCGGCTGGATTGCATCGAGGCCGACCTAGCCGATTTCGGTTACTACCCGA GCGACAAGGCCGGCGAATGGATTACCTACGAGTCCAATAGCGACCTGCGCGACAGCGAAAGCATCCCCCTGGCCGACTCC ATCCACCATTTCTTCAAAGCCGAGGTGCAGCCTCATGTTGAGGAAGCTTGGATCAATCTGGAGTCGGTGAAGATCGGCTA CGAGATCAGCTTCAACAAATACTTCTACAAGCACCAGCCGCTGCGCAGCACGGACGAGGTGGCGCGGGAGATAATTGCGC TGGAGCAGCAGGCCGAGGGATTGATAGCGGAGATTCTTGGCATTTCTGTAGATACCGTTTCAGGGGCGCAGTATGGCCGC GCCTGA Protein sequence : MNHAVHNKLVSFIWSIADDCLRDVYVRGKYRDVILPMVVLRRLDALLEPSKAKVMEELAFQQGEMSQTELDDSALRSASG YVFYNTSKWTLSQLQKTATNNQQILLNNVEEYLDGFSDNVKDIVRRFNLKSQMRHMASKDVLLDVLEKFTSPYVNLTPTD IEDPEGNRLPALSNLGMGYVFEELIRKFNEENNEEAGEHFTPREVIELMTHLVFDPIKDSLPPVMTIYDPACGSGGMLTE SQNFIEEKYPDPTTQRDIHLYGKEINDETYAICKSDMMIKGNNPAHIRPGSTLSVDEFAGSRFDFMLSNPPYGKSWASEQ KFIKDCGEVIDPRFKVSLRDYWDNPEMQDATPRSSDGQLLFLMEMVNKMKASGEGSLGSRIASVHNGSSLFTGDAGSGES NIRRHLIENDLLDAIIQLPNNLFYNTGITTYIWLLSSNKPVQRRGKVQLIDASLLYRKLRKNLGNKNCEFAPEHIELITQ TYLDLASLDRPAGGDGIAAQVFDNRDFGYHKVSIERPDRRKAQFSAERIETLRFDKALREPMQWIYQQWGEALYQDEALA THEKAILAWCEEQGLELNIKQRKKLLNLETWAKQALLVTVANYLMQAIGSDEYDDFNLFAKLVDKVLKQLNKEVGIKLGA SERNQVLNAVSWYDENAVKVLRKVEKFDRAELAALLERLDCIEADLADFGYYPSDKAGEWITYESNSDLRDSESIPLADS IHHFFKAEVQPHVEEAWINLESVKIGYEISFNKYFYKHQPLRSTDEVAREIIALEQQAEGLIAEILGISVDTVSGAQYGR A |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1769 | NP_231404.1 | DNA methylase HsdM | Not tested | VPI-2 | Protein | 0.0 | 71 |
| VC0395_A1367 | YP_001217310.1 | DNA methylase HsdM | Not tested | VPI-2 | Protein | 0.0 | 71 |
| VPI2_0017c | ACA01834.1 | DNA methylase HsdM | Not tested | VPI-2 | Protein | 0.0 | 71 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PSPPH_0107 | YP_272418.1 | type I restriction-modification system DNA methylase | VFG1102 | Protein | 0.0 | 71 |
