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Name : BCE_A0034 (BCE_A0034) Accession : NP_982041.1 Strain : Genome accession: NC_005707 Putative virulence/resistance : Unknown Product : group II intron reverse transcriptase/maturase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3344 EC number : - Position : 32973 - 34856 bp Length : 1884 bp Strand : - Note : identified by match to protein family HMM PF00078; match to protein family HMM PF01844 DNA sequence : ATGAAAAGGTCTAGAAAAGAGGGACTAAAGGATAACTCGCTTAGACATTCTGAATACTACGGTATGCAGGAATCACAAGA CGAGTTATATGCCAAAAGTCTAAATGGAGGAAACTTCAAGCAGTTAATGAAAGTCATAACCTCTGAAAGTAATATTCTTT TAGCGTTTAGAAATATTAAACGCAATTCAGGAAGTATCACAGAGGGTATTGATGGAGTTACTATCAAGGATGTTGAGAAA CTCAGTCAAGAAGATTTCATCAAAATTGTTCAAAAAAGATTTTCTAACTATACCCCACGAAAAGTGCGACGCGTAGAGAT ACCAAAGCCTAATGGGAAAACGAGACCACTCGGAATTCCATCAATGTGGGATAGAATTGCGCAACAATGTATAAAACAAG TACTTGAACCTATATGCGAGGCAAAATTCAACAAACACAGTCACGGTTTCCGTCCAAATCGAAGCCCTGAAACAGCTATG GCAGATGCAACCTTGCGGGTGAATCGAAGTCATATGCAATATGTAGTTAATGTAGACATACAAGGATTTTTCGATGAAGT TAATCACAAAAAACTCATGCGTCAACTATGGACTATGGGAATACGAGATAAACAACTTCTTGTAATCATCCGAAAAATGT TAAAAGCCCCAATAGTACTGCCCAATGGTGAAATGCAATATCCAAACAAAGGTACACCACAAGGTGGAATATTAAGTCCA TTATTAGCCAATATCAATCTAAATGAATTCGATTGGTGGATAACAAATCAATGGGAAGACAGGTTGTTAAAGGAATTGTC ATTAACCATTAAAAAGGGCGGACATGTTGACAAGTACCCACATTACAGTAAAATGCGCAAAACAACGGCTTTGAAAGAAA TGTATATTGTTCGATATGCAGATGACTTCAAAATCTTCACCGCTACGAAATCGAATGCACAAAAAATCTTTAAAGCATGT GAGATGTGGTTGCAAGAACGCCTAAAACTACCAATTTCGAAGGAAAAGTCAAAAATCACAAATCTCCGTAAGGAAAGTAG TGAATTTCTTGGTTTTGAAATCAAAATGGTAAAAAAGGGAAGTAAGTTAATTGCAAGAACACACATATCAAACAAAACCA AAAAGAAAATCCAAAAACAATTTGAAGATCAAATCGCTGTAATTCAAAGAAGTAAAAATGAGGGACTAAAGAATAAAGCT ATTGTTCGCTACAACTCTATGGTAATTGGCACACATAATTACTATGAGATTGCGACCGAGGTTAATAGGGATTTAGCAAG CATCCATAAACACCTAAATATAAGGATTTACAACAGATTACATGTTAATAGGAAAGGGAAGTACAAAGGGAAAGATAAAG GAATTAAAAGATACATGAAATCAGCAATGGTTCGATATCTAAATGATATTCCTATTCTACCACTAGCGTATATCAAGCAC AAAAGCCCCAAAAATAAGGATACAAAAATCAATAAGTATACACCACAAGGTAGAGAATTGATACATAAAAATCAATCTGC AGTGCCTGAATGGAAAATACAATGGTTAAGAGAACACCCTGTCATTAGTCAACGAGCAACTGTTGAATATAATGACAACC GAATCTCTCTATTTGTAGCCCAACATGGCAAATGTGCAATTACTTCCGAGGAACTAATACTATCAGACATGCAATGTCAC CATAAAACACCTTGGAAATATACGCAAGATGATAGTTATAAGAACCTAATCCTAATATGTAGAGATGTACACACATTAAT CCATGCAACATCGCCTGATGTGATCGGAGGTCTAATGGAGAAGTTGAAGCTAAACGAAGGACAACTCATTAAGCTAAATA AACTTAGAAAACAAGCGAAAAATGAAATGTTAGAAATCAATTGA Protein sequence : MKRSRKEGLKDNSLRHSEYYGMQESQDELYAKSLNGGNFKQLMKVITSESNILLAFRNIKRNSGSITEGIDGVTIKDVEK LSQEDFIKIVQKRFSNYTPRKVRRVEIPKPNGKTRPLGIPSMWDRIAQQCIKQVLEPICEAKFNKHSHGFRPNRSPETAM ADATLRVNRSHMQYVVNVDIQGFFDEVNHKKLMRQLWTMGIRDKQLLVIIRKMLKAPIVLPNGEMQYPNKGTPQGGILSP LLANINLNEFDWWITNQWEDRLLKELSLTIKKGGHVDKYPHYSKMRKTTALKEMYIVRYADDFKIFTATKSNAQKIFKAC EMWLQERLKLPISKEKSKITNLRKESSEFLGFEIKMVKKGSKLIARTHISNKTKKKIQKQFEDQIAVIQRSKNEGLKNKA IVRYNSMVIGTHNYYEIATEVNRDLASIHKHLNIRIYNRLHVNRKGKYKGKDKGIKRYMKSAMVRYLNDIPILPLAYIKH KSPKNKDTKINKYTPQGRELIHKNQSAVPEWKIQWLREHPVISQRATVEYNDNRISLFVAQHGKCAITSEELILSDMQCH HKTPWKYTQDDSYKNLILICRDVHTLIHATSPDVIGGLMEKLKLNEGQLIKLNKLRKQAKNEMLEIN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0012 | AAM75218.1 | EF0012 | Not tested | Not named | Protein | 4e-144 | 53 |
| EF2326 | NP_815981.1 | group II intron reverse transcriptase maturase | Not tested | Not named | Protein | 7e-139 | 49 |
