Gene Information

Name : tnpB (MSC_0844)
Accession : NP_975815.1
Strain : Mycoplasma mycoides PG1
Genome accession: NC_005364
Putative virulence/resistance : Unknown
Product : IS1296HV transposase protein B
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 958259 - 959119 bp
Length : 861 bp
Strand : +
Note : -

DNA sequence :
TTGTTAAAAACACATAAAAAAGTTAAGATTCCTATTCTCTTAAAAATAGCTAAATTACCTAAATCGTCTTTTTATGAATG
AAAACATAAGTTAGAAAATACAATAGATAAAGATAAAGAATTAAAGGAAATGATTGTTGACATTTTTAGCAAATCATTTG
AAACGTATGGGTATAGAAGGCTAAAAATGGCCTTAAAATCAAAAGGATATATTGTAAATCACAAAAAGATTTTAAGGTTA
ACTAAAGAGCTTGGAGTTCAGTGTATTAAATTTAGAACAAAAAATGGAAGATATAGTTCTTATAAAGGAACTGTTGGAAA
AATTGCAGATAATGTTTTAAAAAGAAATTTTCATTCTTTACAAGCAAACAAACTTTGATGCACTGATGTAGCAGAGTTTA
AAGTTAATGGTCAAAAGTTATATTTATCACCAATTATTGATCTTTACAATGATGAAATTATTTCATATTCAATTCAAACC
AATCCTAACTTAAACCTAACAAATTCAATGCTAGACAAAGCACTTAAAAAGGTTAAAAATACAAATGGTTTGTTGATTCA
TTCTGATCCGGGATTTCATTATCAGCACATTAGTTGAGCTAAAAAACTAGAAGAAAATAACATAACACAAAGTATGTCTA
GAAAAGGTAATTGCTTAGATAATGCTATTATAGAAAACTTCTTTGGTTTATTAAAGCAAGAAATTTATTATGGTGAAAAA
TATAATTCAGTAGAAGAGTTAACTAAAAGAATTCATAAATATATTTATTGATATAACAACATAAGAATAAAAGAAAAATT
AAAAGGATTGTCTCCTGTACAATTCAGAAAACAATCCTGTTATAATATTGAAAAATTTTAG

Protein sequence :
MLKTHKKVKIPILLKIAKLPKSSFYEWKHKLENTIDKDKELKEMIVDIFSKSFETYGYRRLKMALKSKGYIVNHKKILRL
TKELGVQCIKFRTKNGRYSSYKGTVGKIADNVLKRNFHSLQANKLWCTDVAEFKVNGQKLYLSPIIDLYNDEIISYSIQT
NPNLNLTNSMLDKALKKVKNTNGLLIHSDPGFHYQHISWAKKLEENNITQSMSRKGNCLDNAIIENFFGLLKQEIYYGEK
YNSVEELTKRIHKYIYWYNNIRIKEKLKGLSPVQFRKQSCYNIEKF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 3e-66 55
SEQ_0791 YP_002746129.1 transposase Not tested ¥ÕSeq2 Protein 1e-52 47
SEQ_1760 YP_002746996.1 transposase Not tested ¥ÕSeq3 Protein 1e-52 47
CDBH8_0905 YP_005159997.1 transposase-like protein Not tested Not named Protein 1e-57 45
CDCE8392_1982 YP_005134513.1 transposase-like protein Not tested Not named Protein 3e-58 45
APECO1_1088 YP_853108.1 transposase subunit Not tested PAI IV APEC-O1 Protein 3e-52 45