Gene Information

Name : tnpB (MSC_0629)
Accession : NP_975609.1
Strain : Mycoplasma mycoides PG1
Genome accession: NC_005364
Putative virulence/resistance : Unknown
Product : IS1296LL transposase protein B
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 721854 - 722729 bp
Length : 876 bp
Strand : -
Note : -

DNA sequence :
TTGTTAAAAACACATAAAAAAGTTAAGATTCCTATTCTCTTAAAAATAGCTAAATTACCTAAATCGTCTTTTTATGAATG
AAAACATAAGTTAGAAAATACAATAGATAAAGATAAAGAATTAAAGGAAATGATTGTTGACATTTTTAGCAAATCATTTG
AAACGTATGGGTATAGAAGGCTAAAAATGGCCTTAAAATCAAAAGGATATATTGTAAATCACAAAAAGATTTTAAGGTTA
ACTAAAGAGCTTGGAGTTCAGTGTATTAAATTTAGAACAAAAAATGGAAGATATAGTTCTTATAAAGGAACTGTTGGAAA
AATTGCAGATAATGTTTTAAAAAGAAATTTTCATTCTTTACAAGCAAACAAACTTTGATGCACTGATGTAACAGAGTTTA
AAGTTAATGGTCAAAAGTTATATTTATCACCAATTATTGATCTTTACAATGATGAAATTATTTCATATTCAATTCAAACC
AATCCTAACTTAAACCTAACAAATTCAATGCTAGACAAAGCACTTAAAAAGGTTAAAAATACAAATGGTTTTTTGATTCA
TTCTGATCAGGGATTTCATTATCAGCACATTAGTTGAGCTAAAAAACTAGAAGAAAATAACATAACACAAAGTATGTCTA
GAAAAGGTAATTGCTTAGATAATGCTATTATAGAAAACTTCTTTGGTTTATTAAAGCAAGAAATTTATTATGGTGAAAAA
TATAATTCAGTAGAAGAGTTAACTAAAAGAATTCATAAATATATTTATTGATATAACAACATAAGAATAAAAGAAAAATT
AAAAGGATTGTCTCCTGTACAATTCAGAAAACAATCCTGTTATAATATTGAAAATTTTAGTCCGTGTTTATGGTAG

Protein sequence :
MLKTHKKVKIPILLKIAKLPKSSFYEWKHKLENTIDKDKELKEMIVDIFSKSFETYGYRRLKMALKSKGYIVNHKKILRL
TKELGVQCIKFRTKNGRYSSYKGTVGKIADNVLKRNFHSLQANKLWCTDVTEFKVNGQKLYLSPIIDLYNDEIISYSIQT
NPNLNLTNSMLDKALKKVKNTNGFLIHSDQGFHYQHISWAKKLEENNITQSMSRKGNCLDNAIIENFFGLLKQEIYYGEK
YNSVEELTKRIHKYIYWYNNIRIKEKLKGLSPVQFRKQSCYNIENFSPCLW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 5e-66 55
SEQ_1760 YP_002746996.1 transposase Not tested ¥ÕSeq3 Protein 6e-53 48
SEQ_0791 YP_002746129.1 transposase Not tested ¥ÕSeq2 Protein 5e-53 48
CDBH8_0905 YP_005159997.1 transposase-like protein Not tested Not named Protein 2e-57 46
CDCE8392_1982 YP_005134513.1 transposase-like protein Not tested Not named Protein 6e-58 46
APECO1_1088 YP_853108.1 transposase subunit Not tested PAI IV APEC-O1 Protein 2e-52 45