Gene Information

Name : metB (Bd3795)
Accession : NP_970501.1
Strain : Bdellovibrio bacteriovorus HD100
Genome accession: NC_005363
Putative virulence/resistance : Resistance
Product : cystathionine gamma-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 4.4.1.1
Position : 3666847 - 3668010 bp
Length : 1164 bp
Strand : -
Note : InterPro: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes

DNA sequence :
ATGAAAAAAATGAACGACAACCTTGGTTTTTCCACTCGTGCGATTCATGCCGGCCAAGCTCCGGATCCTTCCACGGGCGC
CATCATGACGCCGGTTTATCTGACCTCGACTTACGTACAAGAATCTCCTGGTGTTCACAAAGGCTGGGAATATTCCCGCA
CGCACAATCCCACTCGTCACGCTTACGAAAGCTGCATGGCAAGTTTGGAGGGTGGCAAACATGGTTTTGCGTTTTCTTCC
GGTTGCGCGGCAACGACAACTGTATTGCATCTTCTAAAAGGTGGCGATCATGTGATTGCCATGGATGACATGTACGGCGG
CACCTTCCGTCTGTTTGACAAAATCCTTAAGCACGACGGCATGGAGTTTTCTTTCGTTGATCTGACGAAGGTTGAAAACT
TTGAAAAAGCCGTAAAACCAAACACCAAGCTGGTATGGTTGGAAACTCCGACCAATCCGACTTTGAAACTGGTTGATATC
AAAAAAATCGCAGCCATTGCCAAAGCCAAAGGCATTCTGGTAGCGGTTGATAACACGTTCATGAGCCCCTACTTCCAAAG
ACCTTTGGAGCTGGGTGCGGATATCGTGGTTCATTCTGCGACAAAATACATCGGCGGCCACAGTGATACGGTCGGCGGTA
TGGTCGTTGTATCCCGCGCGGATCTGGCAGAAAGAATGGCGTTCCTGAGCAACGGTATCGGGGCGACTCAAGGGGCGTTT
GATTCCTTCATGTTCCTGAGAAGTTTGAAAACTTTGCCACTTCGTATGAAGGCCCATCAGGAAAACGCCATGGCGATTGC
GAAGTTTTTGGAATCTCATCCAAAAGTGGACAAAGTCATCTATCCGGGTCTGGAAAGCCATCCTCAGCATGCTTTGGCGA
AAGAACAAATGCATGGTTTCGGTGGGATGATCACTTTCTACATCAAAGGGGGCCTGGATTCGGCTCGTAAGTTCCTGGAA
AACGTGAATGTCTTTTCATTGGCCGAGAGTTTGGGAGGGGTTGAGTCCCTGATCGAGCATCCGGCGATTATGACGCACGC
CTCCGTTCCACCTGAAAACCGCAAGGCTTTGGGGATCGACGACACCCTGATCCGCCTTTCTGTAGGTGTAGAGGATCTGA
ACGACCTGATTGCCGACCTTAAAACTGCTTTTGATAAGGCTTAA

Protein sequence :
MKKMNDNLGFSTRAIHAGQAPDPSTGAIMTPVYLTSTYVQESPGVHKGWEYSRTHNPTRHAYESCMASLEGGKHGFAFSS
GCAATTTVLHLLKGGDHVIAMDDMYGGTFRLFDKILKHDGMEFSFVDLTKVENFEKAVKPNTKLVWLETPTNPTLKLVDI
KKIAAIAKAKGILVAVDNTFMSPYFQRPLELGADIVVHSATKYIGGHSDTVGGMVVVSRADLAERMAFLSNGIGATQGAF
DSFMFLRSLKTLPLRMKAHQENAMAIAKFLESHPKVDKVIYPGLESHPQHALAKEQMHGFGGMITFYIKGGLDSARKFLE
NVNVFSLAESLGGVESLIEHPAIMTHASVPPENRKALGIDDTLIRLSVGVEDLNDLIADLKTAFDKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-82 51
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-83 51
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-51 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metB NP_970501.1 cystathionine gamma-lyase BAC0207 Protein 1e-65 45