Gene Information

Name : fliI (Bd3401)
Accession : NP_970140.1
Strain : Bdellovibrio bacteriovorus HD100
Genome accession: NC_005363
Putative virulence/resistance : Virulence
Product : flagellum-specific ATP synthase
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.14
Position : 3312154 - 3313482 bp
Length : 1329 bp
Strand : -
Note : -

DNA sequence :
ATGAGCGAATTTGAACTGAACCTGGATAAGTATTCTGACGTGATCCAGTCTGTCCACTTGACGAAGGACAGCGGCAAAGT
CACGGAAGTGAACGGGATGCTTATCAAAGGATATCTGCCGGGCGCAAGCGTTGGCAGTATCGTGTCCATCAATCCCAGCG
GGATGGAAAAATCCTTCCTGGCCGAAGTGGTGGGGTTCAAGGACAAGCATGTTCTGATGATGGCTCTGAATGACATGAGA
GGCGTGGCCCTGGGATCAAAAATCGTCCTGGCCCGTCAGATCGCCACCGTGCGCGCGGGTGAAGAGCTTTTGGGCCGTGT
GGTGGATGGCCTGGGTCGTCCTCTGGATGACAAGGGCGAAGTCGAAAATTTCCGTGAAGTTCCTTTGTACAGTGAAGTTC
GCAACCCTCTGGATCGCCGTCCGATCCGTGAGCCTATTGACCTGGGGATTCGTGCCATCAATGGCGCATTAACCGCAGGA
CTGGGCCAGCGTGTCGCTATTATGGCGGGTTCCGGTGTGGGTAAGTCCGTATTGCTGGGTATGATGGCCCGTAATACGAA
TGCCGACGTCAACGTGATTGCCATGATCGGTGAACGTGGACGTGAGGTGCGCGAATTTATCGAGCACGATCTGGGCCCGG
AAGGGATGAAAAGATCGGTTGTTGTCTGTGTGACCAGTGACCAAAGCCCGCTGCTGCGTATGCGGGGCGCTTATGTGGCG
ACGGCTCTGGCTGAATACTTCTCCTCTCAGGGGAAGAATGTGTTGTTGATGATGGACTCCGTGACTCGTTTTGCGATGGC
TCAAAGGGAAATCGGTCTGAGTACCGGTGAACCACCATCCCAAAAGGGTTACACCCCCAGCGTCTTTGCCACCCTGCCTA
AGCTGCTTGAGCGTGCCGGGTCCTTTGAGGGCGAAGGCAGCATCACCGGCTTCTATACGACGCTGGTGGAAGGGGATGAC
ATGAATGATCCGATCGGAGATTCAGTTCGTTCCATCGTGGACGGGCACATCGTTCTAAGCCGCTCTTTGGCTCAGAAGGG
TCACTTCCCGGCGATTGATATCATGCAAAGTGCCAGCCGGGTGATGCGGGCCGTGTCCTCGCCAGAGCACTCCAAGCTGG
CGCAAAAGCTGCGTGAAACCCTGGCGGTCTATAAAGACGCCGAGGATTTGATCAACATCGGTGCCTACAAGCCGGGATCC
AATCCCAAGATTGACCGGGCCGTGAAGGTGATTGATCAGGTGAACGACTTCCTTAAACAAAGAGTCGAGGACCCGACCAA
CTTCACACAGACCGTGCGCCAGATGCAGCAGATTCTTATTAACGCCTGA

Protein sequence :
MSEFELNLDKYSDVIQSVHLTKDSGKVTEVNGMLIKGYLPGASVGSIVSINPSGMEKSFLAEVVGFKDKHVLMMALNDMR
GVALGSKIVLARQIATVRAGEELLGRVVDGLGRPLDDKGEVENFREVPLYSEVRNPLDRRPIREPIDLGIRAINGALTAG
LGQRVAIMAGSGVGKSVLLGMMARNTNADVNVIAMIGERGREVREFIEHDLGPEGMKRSVVVCVTSDQSPLLRMRGAYVA
TALAEYFSSQGKNVLLMMDSVTRFAMAQREIGLSTGEPPSQKGYTPSVFATLPKLLERAGSFEGEGSITGFYTTLVEGDD
MNDPIGDSVRSIVDGHIVLSRSLAQKGHFPAIDIMQSASRVMRAVSSPEHSKLAQKLRETLAVYKDAEDLINIGAYKPGS
NPKIDRAVKVIDQVNDFLKQRVEDPTNFTQTVRQMQQILINA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 5e-99 48
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 8e-95 48
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 8e-95 48
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 5e-92 48
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-92 48
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 5e-92 48
unnamed AAL06369.1 EscN Virulence LEE Protein 6e-89 48
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 1e-91 47
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-90 47
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-89 47
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-88 47
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 1e-89 47
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-88 47
escN AAL57542.1 EscN Virulence LEE Protein 5e-90 46
escN CAC81862.1 EscN protein Virulence LEE II Protein 3e-90 46
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 3e-90 46
escN AAK26715.1 EscN Virulence LEE Protein 5e-90 46
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 2e-84 46
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 5e-74 46
escN AAC38383.1 EscN Virulence LEE Protein 5e-90 45
escN YP_003236088.1 translocator EscN Virulence LEE Protein 5e-90 45
escN AAC31513.1 L0034 Virulence LEE Protein 2e-90 45
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 2e-90 45
escN NP_290268.1 hypothetical protein Virulence LEE Protein 3e-90 45
escN CAI43874.1 EscN protein Virulence LEE Protein 7e-91 45
ECs4568 NP_312595.1 EscN Virulence LEE Protein 3e-90 45
escN YP_003223475.1 translocator EscN Virulence LEE Protein 9e-91 45
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-88 45
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 7e-88 45
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 1e-88 45
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 7e-88 45
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-88 45
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 4e-84 45
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 1e-79 45
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 2e-80 45
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 1e-84 45
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 2e-79 45
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 6e-75 43
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 2e-77 43
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 2e-78 43
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 2e-78 43
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 8e-74 42
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 8e-74 42
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 4e-66 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI NP_970140.1 flagellum-specific ATP synthase VFG2144 Protein 2e-106 52
fliI NP_970140.1 flagellum-specific ATP synthase VFG1254 Protein 4e-92 51
fliI NP_970140.1 flagellum-specific ATP synthase VFG0048 Protein 3e-105 49
fliI NP_970140.1 flagellum-specific ATP synthase VFG2499 Protein 2e-91 49
fliI NP_970140.1 flagellum-specific ATP synthase VFG0192 Protein 4e-101 47
fliI NP_970140.1 flagellum-specific ATP synthase VFG0390 Protein 2e-95 46
fliI NP_970140.1 flagellum-specific ATP synthase VFG2331 Protein 4e-86 45
fliI NP_970140.1 flagellum-specific ATP synthase VFG0730 Protein 3e-90 45
fliI NP_970140.1 flagellum-specific ATP synthase VFG0812 Protein 1e-90 45
fliI NP_970140.1 flagellum-specific ATP synthase VFG0515 Protein 6e-89 45
fliI NP_970140.1 flagellum-specific ATP synthase VFG1008 Protein 4e-69 43