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Name : clpB (Bd3048) Accession : NP_969820.1 Strain : Bdellovibrio bacteriovorus HD100 Genome accession: NC_005363 Putative virulence/resistance : Virulence Product : ABC transporter ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2957139 - 2959706 bp Length : 2568 bp Strand : - Note : InterPro: AAA-protein (ATPases associated with various cellular activities), Heat shock protein DNA sequence : ATGACGCGAAAAAGCCAGGAGGCCATGCAGGCCGCCGCGAGATTGGCTGAGCGCAAAAGCAGCCCCTCTGTAGAGCCGGA ACACCTTCTGATGGAGCTGGTGCAGCAGACCGAAGGCATAGTTCCGCGCATTCTCGACAAATTGAATGTTCCTCAGGCCC AGTTCCTTGCGGAATTGCGGACCAAAATTGATAAATTCCCTCAGGTGACGGGCGGCGGGCAAAAGATGTTTGCCAGCCCT CGCCTTGAAAAGATCTTTCAGGCGGCCGAAACCGAAGCTCAGGAGTGGGGTGATTCCTATATCTCCACCGAGCACTTCTT TATGGCCATGCTTAAAGGCGGGGACTCTGAGCTGAACGGGCTGTTTAAGAAAAACAAAGTCACGGCGGAGGCGGCACGCA CGGCCCTGACTGAAATTCGCGGAAAACAAAAAGTGACGGATGATGATCCTGAAAACAAGTACGAGGTTCTGAACAAGTAT GCCCGTGATCTGACCGCTTTGGCGGCCGAGGGCAAGCTGGATCCGGTGGTGGGGCGTGATGAAGAAATCCGCCGTGTGGT GCAGGTTCTTTCCCGTCGCACCAAAAACAACCCGGTCCTTATTGGGGAGCCTGGGGTGGGTAAAACCGCCATTGCCGAAG GCCTGGCTTTGCGTATCATCAAACAGGACGTGCCGGACAATCTGATTGGCAAAAAACTGATGTCCCTGGATATGGGGGCG TTGATCGCGGGCGCTAAGTACCGCGGGGAATTTGAGGACCGTCTGAAAGCGGTGATCAAAGAAGTCACCTCCAGTGATGG CCAGATTATTCTGTTCATCGACGAACTGCACACCCTGGTGGGCGCGGGTAAAACCGAGGGCGCCATGGATGCAGGGCAGT TGCTGAAGCCGGCCCTGGCGCGCGGTGAATTGCGCTGTATTGGTGCCACCACTTTGGATGAGTATCGCAAGTACATCGAA AAGGATGCGGCTTTGGAAAGACGCTTCCAGACTGTGATGGTCGAGGAACCAAGTGTTGAAGACGCCATCACCATCTTGCG TGGCCTGAAGGAAAAGTACGAAGTCCACCACGGTATTCGCATCACGGATGCGGCCTTGGTGTCGGCGGTGAAATTGTCTC ATCGTTACATCACCAACCGTTTCCTGCCGGACAAGGCGATCGATTTGATCGACGAAGCGGCCAGCAAGCTGGGTATTGAA ACCCGCTCGGTGCCGGAAGAAGTCGACAAGATCGAACGCGAGCTGATGCAGTTGCGCATTGAAAAAGAGGCGCTGAAAAA AGAAAAAGACGAAAGCGCCCGCGAGCGTCTGGCGGTGATTGATAAAGAAATCACCGAGCTGAACGCCAAGAACCAGTTGC TGCGGGAACAATGGGAATTTGAAAAAGGCGGCATTGAGGGCATTAAAAAACTCAAAGCCGACATCGAGGACCTGAAGGTG GCCGTGGCTAAAGCCGAGCGCGAGGGCGATCTGGGCAAGGCGGCCGAACTGAAATACGGAAAGCTTCCTGAGGCCGAGAA AAAACTCAAAGCCCTGGAGGAGCGCAGCAAGGAAGGCGCGAAATCCTCTTCAGAAAACCGCATGCTGAAAGAAGAAGTCG GTCCTGAAGATGTGGCCGAAGTCGTCGCGAAGTGGACGGGTATTCCAGTCAGCAAAATGCTGGAAAGTGAATCCCAGAAA CTGCTGCACATGGAAGATTCTCTGAAACACCGTGTGGTGGGTCAGGATCATGCCCTGACGATTGTGGCCGATGCCATTCG CCGGGCACGGGCCGAGATTTCAGACCCGAACCGTCCGATCGGAACCTTTATGTTCCTGGGTCCGACAGGTGTGGGTAAAA CTGAAACCGTGAAGGCCTTGGCCGAATTCCTGTTCGATGACGAACAAGCCGTTGTCCGTATCGACATGAGTGAATATATG GAAAAACACGCTGTGTCCCGTTTGATCGGCGCGCCTCCGGGCTATGTCGGTTATGAAGAGGGTGGCCAGCTGACGGAATC AGTCCGTCGCCGTCCGTACAGTGTGGTGCTGCTGGATGAGGTTGAAAAAGCCCATCCGGATGTGTTCAACATCCTGTTGC AGGTTCTGGATGACGGTCGTTTGACCGACGGTCAGGGGCGCACGGTGGATTTCAAAAACACCGTGCTGATCATGACCTCG AACGTGGGATCGCAGTCGATTCTGGATCCGGGTATGTCGGAAAATCAGAAACGTGAAGCGGTCAACGAAGCTTTGCGTGA AAGATTCCGTCCAGAGTTCCTGAACCGTATTGATGAGATCGTGATGTTCAAGTCCCTGGGCGAAGCGCAGATTTCCGGCA TCGTGAAGGTGCAGTTGGATCTGGTCGCACAGCGACTGAGAGCAAAAAAGATCGGCATCGACTTCAATCAGGAGGCCATC GACTTCCTGGCGAAGAAAGGCTACGACCCGATTTACGGTGCAAGACCTTTGAAACGTGTGATTCAGACCGAACTTCTGAA TCCACTTTCCAAAGAGATCATCTCGGGCAAAGTCAAAGCCGGAGACACCATCCACGTCAAAGCCAACGGAAGCACCCTGA CCTTCTAA Protein sequence : MTRKSQEAMQAAARLAERKSSPSVEPEHLLMELVQQTEGIVPRILDKLNVPQAQFLAELRTKIDKFPQVTGGGQKMFASP RLEKIFQAAETEAQEWGDSYISTEHFFMAMLKGGDSELNGLFKKNKVTAEAARTALTEIRGKQKVTDDDPENKYEVLNKY ARDLTALAAEGKLDPVVGRDEEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIIKQDVPDNLIGKKLMSLDMGA LIAGAKYRGEFEDRLKAVIKEVTSSDGQIILFIDELHTLVGAGKTEGAMDAGQLLKPALARGELRCIGATTLDEYRKYIE KDAALERRFQTVMVEEPSVEDAITILRGLKEKYEVHHGIRITDAALVSAVKLSHRYITNRFLPDKAIDLIDEAASKLGIE TRSVPEEVDKIERELMQLRIEKEALKKEKDESARERLAVIDKEITELNAKNQLLREQWEFEKGGIEGIKKLKADIEDLKV AVAKAEREGDLGKAAELKYGKLPEAEKKLKALEERSKEGAKSSSENRMLKEEVGPEDVAEVVAKWTGIPVSKMLESESQK LLHMEDSLKHRVVGQDHALTIVADAIRRARAEISDPNRPIGTFMFLGPTGVGKTETVKALAEFLFDDEQAVVRIDMSEYM EKHAVSRLIGAPPGYVGYEEGGQLTESVRRRPYSVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVLIMTS NVGSQSILDPGMSENQKREAVNEALRERFRPEFLNRIDEIVMFKSLGEAQISGIVKVQLDLVAQRLRAKKIGIDFNQEAI DFLAKKGYDPIYGARPLKRVIQTELLNPLSKEIISGKVKAGDTIHVKANGSTLTF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-110 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | NP_969820.1 | ABC transporter ATPase | VFG2084 | Protein | 4e-113 | 42 |
