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Name : lysS (Bd2338) Accession : NP_969165.1 Strain : Bdellovibrio bacteriovorus HD100 Genome accession: NC_005363 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 2236316 - 2237830 bp Length : 1515 bp Strand : - Note : InterPro: Lysyl-tRNA synthetase class-2 DNA sequence : GTGGAGGGGCCCGCGGGCCCCGTAACTGGAGTAATTATGAGCATCAATGAAAATCCGCTAAGAGCCGAGAAGCGCAAAAA ACTTCATGCGCTTCGTGAAAAAGGCATCAACCCGTATCCATACGTCTTTGAAAACAAGGCGAAGATCTCTGAAGTGACTG CGGAGCATGCTGCGACTTTGCAGGCGGGTGAAAAGAAGCCGGAATTTACCTATCGCATTGCTGGCCGTCTGATGACCCTG CGTATGATGGGGAAAGCGTCTTTCTTCAATCTTCAGGATCAGACGGGTTCCGTTCAGGTCTATGTAAAAACTGAGGAGCT GTCTGAACAGGACCGCATGGCATTCGAGCTGGTGGATCTGGGTGACATCGTCGGTATTGAGGGGTTTGTTTTCAAATCCC AAAAAGGTGAGTTTTCGATTTACGCAAAATCCTTCCAGATTCTGACGAAAACCATCGAGCCGTTGCCAGAGAAATTCCAC GGCGTTCAGGACATCGAAATCAAGTATCGTCACAGACACCTGGATTTGATGACCGATGCGGATTCCCGCAAGGTGTTTGA AACTCGTTCCAAGATCATCAAAGAAGTACGTCGCTTCCTTGATGACCGTGGTTTTATGGAAGTGGAAACCCCGACATTGC AGCCGGTTTACGGCGGTGCTGCGGCGACTCCGTTCACCACACACCACAAAGCTTTGGACATGAAGCTTTACATGCGTATT TCCCCTGAACTTTATCTGAAACGCCTGATCGTGGGTGGTTTCGAGAAAGTTTACGAAATCAGCAAAAACTTCCGTAACGA AGGTATCGACCGCACTCACAACCCGGAATTTGCGTTGCTTGAGTTCTACGAGGCTTACACGGACTACAACTATCAGATGA AACAGTTCGAAGAACTGATCTCTTCTTTGGCCTTGAAAATCACCGGCAGCATGAAGGTGACTTATCAGGGTAAAGAGATC GACTTCACTCCTCCTTGGAGACGTCTGACGGTTCATGAAGGTGTTAAAGAATACGCGGGCATTGATCCGGACAAGGCAAC TGATCAGGAAATCTTCCAGGCCATCCGTAAAAACGGTGGCGATATCGATGAGCCGGGTAAACGCGGCGAAATGATCATGG AACTGTTTGAACTGACAGCAGAGCAGCACCTGGTGCAGCCGACATTCGTGATGGATCACCCGGTGGAGATTTCTCCGCTG ACGAAGATTCACCGTCGCGACAGCAGACTGGTTGAGCGTTTCGAACCGTTCGCAGCCTGCATGGAAATCGGCAATGCTTA CTCTGAGCTGAACGATCCGGAAGATCAGTTGGCCCGTTTGAAAGAACAGGAAGCCAACCGTGCGAAGGACGAAGAAGCGC ATCCGATGGATGAAGACTTCCTGCTGGCGATCGACGCTGGTATGCCGCCAACAGGTGGCGTGGGAATCGGTATCGAGCGT ATCGTGATGTTGCTAACGGATAGACCAAGTATCCGTGACATCATCTTTTTCCCAACAATGCGTATTACAAAATAG Protein sequence : MEGPAGPVTGVIMSINENPLRAEKRKKLHALREKGINPYPYVFENKAKISEVTAEHAATLQAGEKKPEFTYRIAGRLMTL RMMGKASFFNLQDQTGSVQVYVKTEELSEQDRMAFELVDLGDIVGIEGFVFKSQKGEFSIYAKSFQILTKTIEPLPEKFH GVQDIEIKYRHRHLDLMTDADSRKVFETRSKIIKEVRRFLDDRGFMEVETPTLQPVYGGAAATPFTTHHKALDMKLYMRI SPELYLKRLIVGGFEKVYEISKNFRNEGIDRTHNPEFALLEFYEAYTDYNYQMKQFEELISSLALKITGSMKVTYQGKEI DFTPPWRRLTVHEGVKEYAGIDPDKATDQEIFQAIRKNGGDIDEPGKRGEMIMELFELTAEQHLVQPTFVMDHPVEISPL TKIHRRDSRLVERFEPFAACMEIGNAYSELNDPEDQLARLKEQEANRAKDEEAHPMDEDFLLAIDAGMPPTGGVGIGIER IVMLLTDRPSIRDIIFFPTMRITK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-97 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | NP_969165.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 1e-97 | 44 |
