Gene Information

Name : Bd2297 (Bd2297)
Accession : NP_969128.1
Strain : Bdellovibrio bacteriovorus HD100
Genome accession: NC_005363
Putative virulence/resistance : Resistance
Product : heavy-metal transporting CPx-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : 3.6.3.-
Position : 2190337 - 2192415 bp
Length : 2079 bp
Strand : -
Note : InterPro: Haloacid dehalogenase/epoxide hydrolase

DNA sequence :
ATGATGGAACATCATCACGACCACCATTCCGGCGGACAGAGGCAGGTGACTTCCGCGATAGACAAAAAATCTGCTGGCAA
GTCTTTGCAACCTGCTCACAGTCATGATTCCCGTTCGGAAATGGTTGATGATTTTCGTATCAGATTCTGGATTTGTCTTT
TTTTAACTCTCCCAATTCTAGTTCTTTCTCCAATGATACAACATTTCGCGGGGCTTGGTGGTGCGCTTCGGTTTCGTGGG
GATTTGTACGTCAGCTGGGCTCTTTCGTCTGTTGTCTTTTTCTATGGTGGGTATCCGTTTTTAAAAGGATTTATCAGTGA
ACTAAAGGCAAGAGCTGCGGGGATGATGACCCTGATTGCTATTGCTATTAGTACGGCCTATGTGTACTCGACCGCAGTCG
TTCTGGGACTGGCGGGAATGGAGTTCTTTTGGGAATTGGCGACTCTGATTGATATCATGCTGCTCGGGCATTGGATTGAG
ATGAAATCCATCTTGGGTGCCTCCAGATCTTTGGAAGAATTGGCAAAGTTGATGCCTTCAAGTGCTCATAAGGTCGTGAA
AGATGGATCGACTCTGGAGGTGCCGATAGAGGAGTTGGTTCCGGGCGATCTCATTTTGGTGAAGCCCGGTGAAAAAATAC
CCTCCGACGGCATTGTGGTGGACGGAATATCATCGGTGGATGAATCCGCTCTGACAGGCGAATCCAAGCCGGTTCCCAAA
GAGGAAGGTGATGAGGTTATTGGTGCGGCCATCAATGGGGAAGGCTCGCTGACGCTTCGGATCCATAAGGCCGGGGCCGA
TTCATACCTTAATCAGGTCATTGAACTTGTTCGGCAAGCCCAGGAAAGCAAGTCAAAGACGCAGGATCTGGCCAACAGGG
CGGCGTCTGTTTTGACTTTTGTCGCGTTGGTGGGTGGGGTGCTGACATTGGTGGCTTGGTTGGCTTTATCAGATCAAAGC
TTGGCATTCGCAATCGAACGGGCGGTCACCGTGATGGTGATTGCATGCCCTCATGCTTTGGGTTTGGCGGTCCCTTTAGT
CGTGGCAGCGTCGACATCCATTGCTGCGACAAGCGGTTTGCTGATCAGGGATCGGGCGGCATTTGAACGGTCGCGCAATG
TGAACGCCATAGTCTTTGATAAAACGGGAACACTCACCGAAGGGCGATTTGGAGTTACAGATATAATTTCATTTGGAGAG
AAGTTTTCAAAAGGCGAGGTGCTTTCTTTTGCGGCGGCGATTGAGGCCCATTCTGAACACCCCATCGCCAAAGGGATTGT
TGCTGCGGTGGACGGCACCCGGCCAGTGTCTTCCTTCAGGGCGGTTCCGGGCAAGGGGGCCATGGGAGATGTTGACGGGA
AAAATATTCTTGTGGTGAGTCCTGGGTATCTTCGCGAAAATCAGATGCAGATTCCAAAGTCAGCTCAAAAGGATCTAGAC
CAACTTTCTGTGCAGGGAAAGACTGTCATCTTTGTTATATGCAATAAAGAGCTGATCGGAGCGATCGCATTGGCTGACAT
AATCAGATCTGAGTCGAAGGAGGCGATTGGTATTCTTCGGAATCAGGGCATAAAGTGCATGATGCTGACTGGAGACAGCG
GACTGGTTGCCAAGTGGGTCGCCGACGAGATTGGTCTTGACGAATACTTTGCGGAGGTTTTGCCTCATCAGAAGTCTGAA
AAGATTTCCGAGGTTCAGAAGCGAGGGCTGATTGTGGCAATGACCGGAGATGGCGTCAACGATGCTCCGGCGTTGGCACA
AGCGGATATTGGAATTGCGGTGGGTGCTGGAACTGACGTTGCTATAGAGACGGCGGACATCATTCTGGTTAAAAGCAATC
CAAAGGACATCGTCGCGATTATCACTTTGGCCAAGGCAACCTACAGGAAGATGATTCAGAACCTGTGGTGGGCCACGGGA
TACAATATTATCGCGATTCCTTTGGCAGCAGGTGCTCTTTATAAAATGGGAGTCGTTCTGAATCCGGCGGTGGGGGCAGT
GCTTATGTCGGTGAGTACTGTTATTGTTGCCGTTAATGCCAGATCATTAGGAATTTCATCTGAAAACAAAAGTTCATAA

Protein sequence :
MMEHHHDHHSGGQRQVTSAIDKKSAGKSLQPAHSHDSRSEMVDDFRIRFWICLFLTLPILVLSPMIQHFAGLGGALRFRG
DLYVSWALSSVVFFYGGYPFLKGFISELKARAAGMMTLIAIAISTAYVYSTAVVLGLAGMEFFWELATLIDIMLLGHWIE
MKSILGASRSLEELAKLMPSSAHKVVKDGSTLEVPIEELVPGDLILVKPGEKIPSDGIVVDGISSVDESALTGESKPVPK
EEGDEVIGAAINGEGSLTLRIHKAGADSYLNQVIELVRQAQESKSKTQDLANRAASVLTFVALVGGVLTLVAWLALSDQS
LAFAIERAVTVMVIACPHALGLAVPLVVAASTSIAATSGLLIRDRAAFERSRNVNAIVFDKTGTLTEGRFGVTDIISFGE
KFSKGEVLSFAAAIEAHSEHPIAKGIVAAVDGTRPVSSFRAVPGKGAMGDVDGKNILVVSPGYLRENQMQIPKSAQKDLD
QLSVQGKTVIFVICNKELIGAIALADIIRSESKEAIGILRNQGIKCMMLTGDSGLVAKWVADEIGLDEYFAEVLPHQKSE
KISEVQKRGLIVAMTGDGVNDAPALAQADIGIAVGAGTDVAIETADIILVKSNPKDIVAIITLAKATYRKMIQNLWWATG
YNIIAIPLAAGALYKMGVVLNPAVGAVLMSVSTVIVAVNARSLGISSENKSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 2e-87 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bd2297 NP_969128.1 heavy-metal transporting CPx-type ATPase BAC0629 Protein 0.0 64
Bd2297 NP_969128.1 heavy-metal transporting CPx-type ATPase BAC0079 Protein 1e-122 44
Bd2297 NP_969128.1 heavy-metal transporting CPx-type ATPase BAC0383 Protein 2e-102 43