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Name : pilB (Bd1509) Accession : NP_968396.1 Strain : Bdellovibrio bacteriovorus HD100 Genome accession: NC_005363 Putative virulence/resistance : Virulence Product : type IV pilus biogenesis protein PilB Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1429968 - 1431668 bp Length : 1701 bp Strand : + Note : - DNA sequence : ATGTCTTCACTCAAAATCGGGGAAATTCTAGTCAAGCAAGGTTTGCTCAAGCCTGACCAATTGGCGTTGGCCATGGAAGA GCAGAAAAAAACTGGGCAGAAGCTGACGAATTCCATCATTCAACTCGGGTACTTAAAAGACAATCAGATCCTTCGCGCTG TTGAAAAACACTTCGCGGTTCCAGGGGTCGAGGTCAACACGTTTGAAATCGATGCAACTGTCATTGCAATGATTCCCAAA GATGTGTGTGAGAAAAACACATTGATCCCTTTGCAGAAAGCCGGGAACACCCTGGTTGTCGCTTTTGCTGATCCTTCTAA TATTATAGTCAAAGAAGATTTGCGTTTCATCACTCGTTGCCGCATCCAAGCGGTGGTGGGGACTGAAAGTGCCATCATGT CCGGTATTGAAAAATACTATGGCGGCAGCATCAGCACCAAGTCTTTGAACACCATGGGGGTGGGTGATGAGGATGACTTT ATCCTCAGTGCCGGTCCTGCAACAGAAGTCATCGATCAGGACGGTGGGTCTGAAGACGCGCCGATCATCAAGTTCGTGAA CTCGATCCTGGCCGATGCGATCCGCAAAAAAGTATCGGATATTCACTTTGAACCTTACGAAAAAAAGTACCGCGTGCGTT TCCGTATCGACGGGAACTTGGTGGAAGCTACAGCACCTCCGGCAGGTACGGCGGCGGCAATTGCCTCTCGTATTAAGATC ATGTCCAAACTTGATATCGCCGAAAAACGTCGTCCGCAGGATGGTCGTTTGAAAGTGCGCACCAAGGCCAAAGAGATGGA CTTCCGTGTCAGCGTACTGCCGACTCTTTGGGGTGAAAAAGTTGTTTTGCGTCTTTTGGATAAATCAAACCTGCAGCTGG ATATGACCAAGCTGGGTTTTGAAGAAGACGATTTGAAACTGTTCAAAGCCACCATCAATTTGCCCCAAGGCATGGTTCTG ATCACGGGTCCGACGGGTTCGGGTAAAACCACCACGATTTATTCCGCCTTGGCGGAGCTGAATCAGCCGGACGTGAACAT CTCCACCGCGGAAGATCCGGTGGAGTTCAACTTGGAAGGTATCAACCAGGTTCAGATGAACCCGGATATTGATTTGAATT TCTCCAGCGCCCTGAAGTCCTTCCTGCGTCAGGATCCGGATGTTGTGATGGTGGGGGAGATTCGTGACCTTGAAACCGCC GAGATCGCGTTTAAAGCGGCCTCCACAGGTCACTTGGTCGTAAGCACCCTGCATACCAACGATGCACCTGGAACGGTCAT TCGTCTGACCGAGATGGGTGTGGCTCCGTACATTATCACTTCGACTGTGAATCTGATCGTGGCTCAGCGTCTGGTCGGTA AAGTCTGCGAGTCCTGCAAAGCGCCTGTGGAAGTGCCGGCGCAAACGCTGCTGAATCTGGGCGTGCCGCAAGCTGAAATC GGGGACTATAAATTGATGCGAGGAAAAGGTTGCGCCAACTGCAACAACACCGGCATCAAAGGCCGTCTGGCGATTTACGA GTTGCTGGCCATGACCGAGAAAATGAAAGAGGCCATCTTGAAGGGTGCCTCCACCGGTCAGCTTCGTTTCCTGGCCCGTG AACAGGGGATGAGAACTCTGCGCCGAAGTGCGCTGTTAAAGTTAAAACGTGGCGTAACAACTATTGAAGAAGTGCTCAAC GCATCAGTGAAGGACACCTAA Protein sequence : MSSLKIGEILVKQGLLKPDQLALAMEEQKKTGQKLTNSIIQLGYLKDNQILRAVEKHFAVPGVEVNTFEIDATVIAMIPK DVCEKNTLIPLQKAGNTLVVAFADPSNIIVKEDLRFITRCRIQAVVGTESAIMSGIEKYYGGSISTKSLNTMGVGDEDDF ILSAGPATEVIDQDGGSEDAPIIKFVNSILADAIRKKVSDIHFEPYEKKYRVRFRIDGNLVEATAPPAGTAAAIASRIKI MSKLDIAEKRRPQDGRLKVRTKAKEMDFRVSVLPTLWGEKVVLRLLDKSNLQLDMTKLGFEEDDLKLFKATINLPQGMVL ITGPTGSGKTTTIYSALAELNQPDVNISTAEDPVEFNLEGINQVQMNPDIDLNFSSALKSFLRQDPDVVMVGEIRDLETA EIAFKAASTGHLVVSTLHTNDAPGTVIRLTEMGVAPYIITSTVNLIVAQRLVGKVCESCKAPVEVPAQTLLNLGVPQAEI GDYKLMRGKGCANCNNTGIKGRLAIYELLAMTEKMKEAILKGASTGQLRFLAREQGMRTLRRSALLKLKRGVTTIEEVLN ASVKDT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-80 | 43 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-80 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pilB | NP_968396.1 | type IV pilus biogenesis protein PilB | VFG0182 | Protein | 4e-85 | 48 |
| pilB | NP_968396.1 | type IV pilus biogenesis protein PilB | VFG0112 | Protein | 4e-112 | 47 |
| pilB | NP_968396.1 | type IV pilus biogenesis protein PilB | VFG1880 | Protein | 1e-100 | 44 |
| pilB | NP_968396.1 | type IV pilus biogenesis protein PilB | VFG2048 | Protein | 4e-81 | 44 |
