|
Name : hslU (LJ1112) Accession : NP_964968.1 Strain : Lactobacillus johnsonii NCC 533 Genome accession: NC_005362 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding subunit HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 1017688 - 1019082 bp Length : 1395 bp Strand : + Note : heat shock protein involved in degradation of misfolded proteins DNA sequence : TTGACTGAAGAAAAAACTCCAAAACAAATTGTAGAATTACTTGATAAATATATTATTGGCCAAAACGAAGCTAAAAAGTC TGTTGCTGTTGCATTGTATAACCGTTATCGTAGATTGCAACTACCAAAACAAATGCAACAAGATATTACGCCAAAAAACA TGTTAATGGCAGGTCCTACCGGTGTAGGTAAGACAGAAATTGCACGTCGACTTGCTAAAATTGTTGATGCACCTTTTGTA AAGGTTGAAGCAACTAAGTTTACTGAGGTTGGTTATGTTGGACGTGATGTTGAATCAATGGTCCGTGACTTAGTTGAAGA AGCAGTTCGAATGGAAGAAAAAGATCAATTTGAACATGTTAAAATGCAAGCTACTAAGAAAGCTAATAATCGTCTAGTTA AGTTAATTGTGCCCGGAATTAAACGTGAAAACCGTGAAAATTCTATGCAACAAATGATGCAGATGCTTTCTGGTAACTTC AACATGAATCAACCTCAAGATAATGAAGAAGTAACTGATGCTATTCGTAATGAACGTCTTAGCGTAGCTGATCAACTTAA TAAGGGATTACTTGAGAATCGTGAAGTTACCATCGAAGTAGAACAAGCTCCAAAGGTAAACCCAATGGGCGATATGATGG GCCAAATGGGAATTGACATGTCAAGTTTGATGGGCGACTTAATGCCTAAGAAGACTGTTAAGCGTACGCTAAAAGTATCA GATGCACGTGAAGTTTTAATTCAAGAAGAATCAAAGAAGTTAATTAACTACGATTCTCTCTACCAACGTGCAATTGAGCG TACTCAACAAAATGGTATTATCTTTATCGACGAAATTGATAAGATCACTGCTGGTAACAAGAAGACCTCTGGTGAAGTTT CTCGTGAAGGTGTACAAAGAGATATCTTACCAATTGTTGAAGGTTCAACTGTTTCAACTAAGTATGGTCCGGTATCTACT GACCACATCCTATTTATTGCTGCTGGTGCTTTTGCCGAAAGTAAGCCAAGCGATTTAATTCCAGAATTGCAAGGACGTTT TCCAATTCGTGTTGAATTAAATGCCTTGACCCAAGAAGACTTCGTTAAGATCTTAAAGGATCCACAAAACTCACTTTTGA AGCAATATATTGCACTTCTTAAGGCTGATGGTATTAAATTAGTCTTTACTCAAGAAGCAATTGACCGAATTGCTCAAATA GCTTTTGAAGTAAATCAAGGAACTGACAACATTGGTGCCCGTCGTTTGGCAACTATTTTAGAAAAATTACTTGAAGATGT TCTTTACGAAGGACCAGACATGAACATGGGTGAGATCACTATTACTCAGAAGTATGTTGATCAAAAATTGAGTGATATAA TTATTAATAAAGACTTAACAAAATTTATTTTGTAA Protein sequence : MTEEKTPKQIVELLDKYIIGQNEAKKSVAVALYNRYRRLQLPKQMQQDITPKNMLMAGPTGVGKTEIARRLAKIVDAPFV KVEATKFTEVGYVGRDVESMVRDLVEEAVRMEEKDQFEHVKMQATKKANNRLVKLIVPGIKRENRENSMQQMMQMLSGNF NMNQPQDNEEVTDAIRNERLSVADQLNKGLLENREVTIEVEQAPKVNPMGDMMGQMGIDMSSLMGDLMPKKTVKRTLKVS DAREVLIQEESKKLINYDSLYQRAIERTQQNGIIFIDEIDKITAGNKKTSGEVSREGVQRDILPIVEGSTVSTKYGPVST DHILFIAAGAFAESKPSDLIPELQGRFPIRVELNALTQEDFVKILKDPQNSLLKQYIALLKADGIKLVFTQEAIDRIAQI AFEVNQGTDNIGARRLATILEKLLEDVLYEGPDMNMGEITITQKYVDQKLSDIIINKDLTKFIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 1e-92 | 46 |
