Gene Information

Name : LJ1080 (LJ1080)
Accession : NP_964936.1
Strain : Lactobacillus johnsonii NCC 533
Genome accession: NC_005362
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 984149 - 985918 bp
Length : 1770 bp
Strand : +
Note : -

DNA sequence :
ATGAAGAAAACTAAAATTGTTAGTACTTTAGGGCCAGCCTCAAACGATGTTGAGACTATTACTAAATTAGCTGAAGCAGG
TGCAAACGTATTCCGTTTCAACTTCTCACACGGTGACCACGAAGAACACCGTGCACGTATGAACATGGTTCGTGAGGTTG
AAAAGAAGACTGGTAAACTTCTTGGCATTGCTCTTGATACTAAGGGTGCCGAAATTAGAACTACTGAACAAGAAGGCGGC
AAGTTCACTATTAACACTGGTGACACTATCCGTATTTCTATGGACGACACTAAGAAGGGTAACAAGGACATGATCCACGT
TACCTACGATGGTCTTTACGACGATACTCACGTTGGTGGTCACGTATTAATCGATGATGGTTTAGTTGACCTTTTGATTA
AGGACAAAGATGACGCTAAGAGAGAATTAGTTTGTGAAGCTCAAAACACTGGTGTAATCGGTTCTAAGAAGGGTGTTAAC
GCTCCTGGCGTTGAAATCCGCCTCCCAGGTATTACTGAAAAAGATACTAACGATATTAAGTTCGGTTTGAAGGAAGGTAT
CAACTTCATCTTTGCTTCATTCGTTCGTAAAGCACAAGATGTTCTTGACATTCGTCAATTGCTTGAAGAAGCACATTGTG
AATACGTAAAGATCTTCCCTAAGATTGAATCACAAGAAGGTATTGACAACATCGACGAAATCTTAAAGGTTTCTGATGGT
TTAATGGTTGCTCGTGGTGACATGGGTGTTGAAATTCCATTTATCAATGTTCCATTTGTACAAAAAGAATTGATCAAGAG
ATGTAACGCTTTAGGTAAGCCAGTTATTACTGCTACTCAAATGCTTGACTCAATGCAAGAAAACCCACGTCCTACTCGTG
CCGAAGTTACTGACGTTGCCAACGCTGTTCTTGATGGTACTGACGCAACTATGCTTTCAGGTGAATCTGCAAACGGTCTT
TACCCAGTTAAAGCTGTTAAGGCTATGGCTGAAATCGACATGCGTACTGAAAAGCAACTTGCTAAGCGTAACAAGTTAGC
TCTTCAAAGATTCGAAGAATACAAGGGTTCAAACGTTACTGAAGCTATCGGTGAATCAGTTGTTAGAACTGCTGAAGAAT
TGGGCGTTAAGACTATTATTGCTGCAACTGAATCTGGTTACACTGCACGTATGATTTCTAAGTACCGTCCAAACGCAGAC
ATTATTGCTATGACTTTCAACGACAAGATTCAACACTCATTAGGTGTTGTTTGGGGTGTAAAGCCAATGTTGACTGAAAA
GCCTAAGTCTACTGAAGAAATGTTTGAAAAGGCAGCTGAACTTGCTAAAGAAACTGGTCTTGCAAAAGACGGTGACTTAG
TAATTATCGTTGCTGGTGTTCCTTTGGGCGAAACTGGTACTACTAACTTGATGAAGTTACAATTAATCGGTACCCAACTT
GTTAAAGGTTTAGGTGTTGGTGAACAATCAGTTATTGGTAAAGCTGTAGTTGCAACTTCTGCTGAAGAAGCTAACAGCAA
AGTTCAAGATGGTGACATCTTAGTTGCTAAGACTACTGATAAGGATTACTTACCAGCAATCAAGAAGGCTTCAGGTATGG
TAGTTGAAGCTTCTGGTTTAACTAGCCATGCAGCTGTTGTTGGTCTTTCACTTGGTATCCCAGTTATCGTTGGTGCTACT
GATGCAGTAGAAAAGATCAAGGATGGTTCTAAGATTACTGTTGATGCTCGTCGCGGTGCTGTTTACCAAGGCGAAGCAAC
TAACCTTTAA

Protein sequence :
MKKTKIVSTLGPASNDVETITKLAEAGANVFRFNFSHGDHEEHRARMNMVREVEKKTGKLLGIALDTKGAEIRTTEQEGG
KFTINTGDTIRISMDDTKKGNKDMIHVTYDGLYDDTHVGGHVLIDDGLVDLLIKDKDDAKRELVCEAQNTGVIGSKKGVN
APGVEIRLPGITEKDTNDIKFGLKEGINFIFASFVRKAQDVLDIRQLLEEAHCEYVKIFPKIESQEGIDNIDEILKVSDG
LMVARGDMGVEIPFINVPFVQKELIKRCNALGKPVITATQMLDSMQENPRPTRAEVTDVANAVLDGTDATMLSGESANGL
YPVKAVKAMAEIDMRTEKQLAKRNKLALQRFEEYKGSNVTEAIGESVVRTAEELGVKTIIAATESGYTARMISKYRPNAD
IIAMTFNDKIQHSLGVVWGVKPMLTEKPKSTEEMFEKAAELAKETGLAKDGDLVIIVAGVPLGETGTTNLMKLQLIGTQL
VKGLGVGEQSVIGKAVVATSAEEANSKVQDGDILVAKTTDKDYLPAIKKASGMVVEASGLTSHAAVVGLSLGIPVIVGAT
DAVEKIKDGSKITVDARRGAVYQGEATNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 8e-84 47
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 5e-84 47
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 5e-84 47
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 9e-84 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LJ1080 NP_964936.1 pyruvate kinase VFG0479 Protein 2e-84 47