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Name : secA (LJ0846) Accession : NP_964701.1 Strain : Lactobacillus johnsonii NCC 533 Genome accession: NC_005362 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecA Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0653 EC number : - Position : 742192 - 744591 bp Length : 2400 bp Strand : + Note : functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis ap DNA sequence : ATGGCTAATATTCTTAAAAAAATTTACGATAACGATAGAAGAGAATTAAAGAAATTTGAAAAATTAGCAACTAAGGTAGA ATCTTTAGGAGACGAGTACGAAAAATTATCTGATGAGCAGCTCCAAGCAAAGACACCAGAATTCCGTAAGCGTTTAAAAA ATGGTGAAACGTTAGACGATATTCTACCAGAAGCATTTGCTACAGCACGTGAAGGTGCAAAAAGAGTTTTAGGATTATAT CCTTTCCGTGTTCAAATTATTGGTGGTATTGCGCTTCATTACGGTAATATCGCCGAAATGATGACTGGAGAAGGTAAGAC CTTAACTGCTACTTTGCCAGTTTATTTAAATGCTCTAACGGGGAAAGGTGTTCATGTGGTAACAGTTAATGAATACCTAT CTAGCCGTGACGAAAGCGAAATGGGGCAATTATATAAGTGGCTCGGTTTATCTGTAGGGTTAAACCTTAATTCAATGTCT GCAGATGAAAAGAGAGATGCTTATAACTGTGACGTTACTTATTCAACAAACTCAGAATTAGGATTTGATTATTTAAGAGA CAATATGGTTGTCTACAAAGATCAAATGGTTCAACGTCCACTTAACTATGCAATTATCGATGAGGTTGACTCAATTTTAA TTGATGAGGCTAGAACACCGTTAATTATTTCTGGACAAGCAGAGCAAGCAAACAGTGAATATATTCGTGCTGATCGTTTT GTTAAAACTTTAGTTGAAGATAAAAGTGATGACGATGTAGATGATGATGAAGACCATGGTGACTACAAGATTGATTGGCC AACTAAAACAATTAATTTGACCAATCAAGGAATCAAAAAAGCTTGTGAACACTTTGGTTTGAAGAACCTGTATGATATTG ATAACCAAGTCTTAGTTCACCATATTGATCAAGCTTTAAGAGCTAACTACATTATGTTGAAAGATATCGACTATGTGGTT CAAAATGGCGAAGTTATGATTGTTGATTCTTTCACTGGACGTGTAATGGAAGGCCGTCGTTATTCTGATGGACTTCACCA GGCTATTGAAGCAAAAGAAGGGGTTAAGATTCAAGAAGAGTCTAAAACTCAAGCAACCATTACTTACCAGAACTTCTTTA GAATGTATAAAAAGCTGGCAGGTATGACAGGTACAGCGAAGACGGAAGAAGAAGAATTTCGTGAAATCTATAACATGGAA GTAATCACTATTCCAACTAACCGTCCAATTGCTCGTAAAGACTTGCCTGATATTTTATATCCAACCTTAGATTCTAAATT TGAAGCTGTAGTAAAAGAAATTAAGGAGCGCCACGCCAAAGGACAACCGGTATTGGTTGGTACTGTTGCTATTGAAAGTT CTGAACGTTTAAGCCAAATGCTTAACCAAGCAGGTATTCCACATGCAGTTTTGAATGCGAAAAACCATGCTAAAGAAGCA GAGATCATTATGAATGCCGGTCAAAGAGGAGCAGTTACCATTGCTACTAACATGGCTGGTCGTGGTACTGATATTAAATT AGGACCCGGTGTTAAAGAATTAGGCGGTTTAGCTGTTATTGGTACTGAACGTCACGAGTCTCGTCGTATTGATAATCAGC TTCGTGGTAGATCCGGTCGTCAAGGTGATCCTGGTGTAACAAGATTTTATCTTTCTCTAGAAGATGATTTGATGAAGCGT TTTGGTGGAGATCGAGTAAAATTATTCCTTGATCGAATATCTGATAATGATGATGACAAAGTCATTGAATCACGTATGAT TACTAAACAAGTTGAATCAGCTCAAAAGCGTGTTGAAGGAAATAACTACGATACTCGTAAGCAAACTTTGCAATACGATG ATGTTATGCGTACGCAACGTGAAATTATTTACGGGGAAAGAATGCAGGTTATTTCTGAAGATAAATCATTGAAACCTGTT TTAATGCCAATGATTAAACGGACTATTGATCATCAAATTGATATGTACACCCAAGGTGATAAAAAAGATTGGCGTAATGA TCAAATAAGAGACTTCATTTCCTCTGCTATTACTGATGAAGAAACTACTAAAAAGCTTAATATGAAGCACTTAAGTGCGG AAGAACTTAAGAAGAGACTTTATCAGATTGCAGAAGACAATTATGCTGAAAAAGAAAAGCAACTTGCTGATCCTGAGCAA ATGCTAGAATTTGAAAAAGTTGTTATCTTGCGTGTTGTAGATGAACGTTGGACTGATCATATTGATGCCATGGATCAATT ACGACAATCTATTAGTCTAAGAGGATATGGACAACTAAATCCGTTAGTTGAATATCAAGAATCTGGCTATAGAATGTTTG AGGAAATGATCAGTAATATCGAATTTGATGCCACCCGTCTATTTATGAAGGCTCAAATAAGACAAAACATTAGTCGATAA Protein sequence : MANILKKIYDNDRRELKKFEKLATKVESLGDEYEKLSDEQLQAKTPEFRKRLKNGETLDDILPEAFATAREGAKRVLGLY PFRVQIIGGIALHYGNIAEMMTGEGKTLTATLPVYLNALTGKGVHVVTVNEYLSSRDESEMGQLYKWLGLSVGLNLNSMS ADEKRDAYNCDVTYSTNSELGFDYLRDNMVVYKDQMVQRPLNYAIIDEVDSILIDEARTPLIISGQAEQANSEYIRADRF VKTLVEDKSDDDVDDDEDHGDYKIDWPTKTINLTNQGIKKACEHFGLKNLYDIDNQVLVHHIDQALRANYIMLKDIDYVV QNGEVMIVDSFTGRVMEGRRYSDGLHQAIEAKEGVKIQEESKTQATITYQNFFRMYKKLAGMTGTAKTEEEEFREIYNME VITIPTNRPIARKDLPDILYPTLDSKFEAVVKEIKERHAKGQPVLVGTVAIESSERLSQMLNQAGIPHAVLNAKNHAKEA EIIMNAGQRGAVTIATNMAGRGTDIKLGPGVKELGGLAVIGTERHESRRIDNQLRGRSGRQGDPGVTRFYLSLEDDLMKR FGGDRVKLFLDRISDNDDDKVIESRMITKQVESAQKRVEGNNYDTRKQTLQYDDVMRTQREIIYGERMQVISEDKSLKPV LMPMIKRTIDHQIDMYTQGDKKDWRNDQIRDFISSAITDEETTKKLNMKHLSAEELKKRLYQIAEDNYAEKEKQLADPEQ MLEFEKVVILRVVDERWTDHIDAMDQLRQSISLRGYGQLNPLVEYQESGYRMFEEMISNIEFDATRLFMKAQIRQNISR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secA2 | YP_006310687.1 | preprotein translocase subunit SecA2 | Not tested | FWisland_3 | Protein | 2e-145 | 43 |
