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Name : LJ0331 (LJ0331) Accession : NP_964351.1 Strain : Lactobacillus johnsonii NCC 533 Genome accession: NC_005362 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit clpA-like protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 368143 - 370611 bp Length : 2469 bp Strand : + Note : - DNA sequence : ATGGAAAAATCATATAGTGATAGTGCAAAAAATGTTCTTGAAATTGCTAAAGAGCAAGCACAAAACTTTCACCATCGAAT TATTGGAACAGAGCATGTTCTGCTTGCTTTAGTAATTGAAGCTAATGGGGATGCTGGAAAACTTTTGCGTGAAAGAAATG TAACACTAACCTTAGTGCGAGAAGAAATTGAAAGATATACTGGCTATGGTTCAAGTCCAAAGGCCACATATATGGAAATG TCCCCACGTTTAAGTTTAGTTTTGAATTTTGCTAAACAAAGGGCTGACGAATTAGGGACTGCTCAAATTGAGACAAAACA TATTTTGCTAGGTTTGTTAGCTAGTGATCAAATTTTAGCAAGTTTAATTTTGAAAAATATTGGTGTAGATCCACGAGATT TAAGTCAGGATGTAAATGATAGTTTCATGGATGGTTCTGGGGAAGAAAATAATGTTCTTGGTATTTCTTCAGCCACTGGT ATGAAAAAAGGTAAGTCATTGACTCCAAATTTAGATAAAGTTAGTGTGAATCTAAATAAAAGAGCCCGTGAAGGTGCAAT TGACCCGGTAATTGGGAGAGATAAAGAAATAAAAAGAGTAATTCAAATCTTATCTCGAAGAACCAAAAACAATCCCGTTT TGGTAGGAGAACCTGGTGTTGGTAAGACTGCAGTTGCCCAAGGAATAGCAGCCGCAATTGTAAATCATGAAGTTCCAGAT ACTCTAGCTAAAAAACGAGTTATGGCCTTGGACATGGGAAGTTTAATTGCTGGAACTAAATATCGTGGTGAATTTGAAGA TAGAATGAAGAAGATTCTAAAAGAAATTCAACAGGATGGTTCAGTTATCTTATTTGTTGATGAAATGCATACTTTGATTG GTGCAGGTGGCGCGGAAGGTGCAATTGATGCTTCAAATATCTTAAAGCCTTCATTAGCACGTGGCGATATTCAAATGATT GGCGCTACTACTTTTGATGAGTACCAAAAATATATTGAAAAAGATCAAGCTTTAGCAAGACGTTTTCAACAAGTAAAAAT TGGTGAACCTTCAAAAGAAGAAACTGTGGATATTTTAAAAGGCTTGCGCCCTAAATATGAAAAATTTCACAATGTAAAAA TTGAAGATGAGGCAATTAATGATGCAGTTGAATTTTCAACACGGTATATTGCTAACCGATTCTTACCTGATAAAGCAATT GATTTGATTGATGAAGCAAGCGCAGCTGTAAAAATTCAAGCAATCGGTAAAAGTGATCCTCGTCTAACTAAATTGGATAC ACAAATTAATGATGTTATTCATCAGAAAGAACAAGCTGCAGAAAATCAAAATTTTGTTCAAGCAGCTAAGTTACGGGATG AGGAAAATAAGCTTACACAGGATCGGGATAAATTAATCGAAAAAGTAGAGAATAAAAACTCTAAAAAGTCGATTGTTGAT TCTGATAAGATCGCTCAAATTGTATCTGAATGGACTGGTGTGCCCGTTACTAGAATGAAGAAGAGTGAAACTAAACGTTT AGCTCATTTAGAAAGTATTTTGCATGAACGTGTAATTGGACAGGACGAAGCTATCAGTGCCGTAAGTCGAGCAATTAGAC GAAGTAGAAGTGGAATCAAGGATGAAAATCGTCCAATCGGTTCGTTCTTATTCCTAGGACCTACTGGTGTTGGTAAGACA GAATTAGCTAAGGCTCTTGCTGCAGCAGTTTTTGGCTCAGAACGAAATATTATTCGTGTAGACATGTCTGAATACATGGA TCAGATTGCAACAAGCAAATTAATTGGTTCGGCACCAGGATATGTAGGATATGAAGAGGGTGGTCAGCTCTCAGAACGTG TAAGACGTAATCCATATTCAGTAATTTTATTGGATGAAGTAGAAAAAGCTCATCCGGACGTGTTTAATTTATTGCTTCAA GTTTTGGATGAAGGATTTTTAACTGATTCTAAAGGTAGAAAAGTCGATTTTAGAAATACCATTATTATCATGACTTCTAA CCTTGGGTCACGTAGTTTGCAAGAAGATAAGACAGTTGGGTTTGCAGCGGATAATGCTGATAAAAATAAACTTCAACAAG AAAAAGTTACGGCGGCTGTTAAACAATTCTTCAGACCAGAATTTTTAAACAGAATTGATGAGACCGTGGTCTTTGATAGC TTAACTAAGAAACAATTGCGTGAAATTGTTAGCTTAATGACTGGTCATTTGGTAGATCGCTTAGCTAAAAAAGACGTAAC CTTAAAGATTTCACCAGCGGCTTTAGATGTATTGGCTAAAGATGGATTTGATCCAGAGATGGGCGCTCGTCCATTACGTC GTGCAATTCAACATGAACTTGAAGATGTAATTGCTGAAGATTTAATTAGTGAAAAAATTAAGGCTGACCAAATTGTAAAA GTTGGAGCTCATCAAGGTAAATTAAAATTTACAATTCTTGATAAAGATAACACTTTAGTGAAAAATTAG Protein sequence : MEKSYSDSAKNVLEIAKEQAQNFHHRIIGTEHVLLALVIEANGDAGKLLRERNVTLTLVREEIERYTGYGSSPKATYMEM SPRLSLVLNFAKQRADELGTAQIETKHILLGLLASDQILASLILKNIGVDPRDLSQDVNDSFMDGSGEENNVLGISSATG MKKGKSLTPNLDKVSVNLNKRAREGAIDPVIGRDKEIKRVIQILSRRTKNNPVLVGEPGVGKTAVAQGIAAAIVNHEVPD TLAKKRVMALDMGSLIAGTKYRGEFEDRMKKILKEIQQDGSVILFVDEMHTLIGAGGAEGAIDASNILKPSLARGDIQMI GATTFDEYQKYIEKDQALARRFQQVKIGEPSKEETVDILKGLRPKYEKFHNVKIEDEAINDAVEFSTRYIANRFLPDKAI DLIDEASAAVKIQAIGKSDPRLTKLDTQINDVIHQKEQAAENQNFVQAAKLRDEENKLTQDRDKLIEKVENKNSKKSIVD SDKIAQIVSEWTGVPVTRMKKSETKRLAHLESILHERVIGQDEAISAVSRAIRRSRSGIKDENRPIGSFLFLGPTGVGKT ELAKALAAAVFGSERNIIRVDMSEYMDQIATSKLIGSAPGYVGYEEGGQLSERVRRNPYSVILLDEVEKAHPDVFNLLLQ VLDEGFLTDSKGRKVDFRNTIIIMTSNLGSRSLQEDKTVGFAADNADKNKLQQEKVTAAVKQFFRPEFLNRIDETVVFDS LTKKQLREIVSLMTGHLVDRLAKKDVTLKISPAALDVLAKDGFDPEMGARPLRRAIQHELEDVIAEDLISEKIKADQIVK VGAHQGKLKFTILDKDNTLVKN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 1e-177 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LJ0331 | NP_964351.1 | ATP-dependent Clp protease ATP-binding subunit clpA-like protein | VFG0079 | Protein | 0.0 | 53 |
| LJ0331 | NP_964351.1 | ATP-dependent Clp protease ATP-binding subunit clpA-like protein | VFG0080 | Protein | 4e-148 | 50 |
