Gene Information

Name : LJ0231 (LJ0231)
Accession : NP_964246.1
Strain : Lactobacillus johnsonii NCC 533
Genome accession: NC_005362
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0798
EC number : -
Position : 266364 - 267401 bp
Length : 1038 bp
Strand : +
Note : contains sodium bile acid symporter domain

DNA sequence :
ATGAATACGTCAAAAGGCTTATCTTTCATGGATCGCTATATGACTTTATGGGTATTTCTAGCTATGGCTTTAGGAATTGT
GATTAGTTTTGTCTTTCCATCATTCCCTAAGTTAATTAACAGTTGGTCAGTGGGTACTACTTCAATACCTATTGCGATTG
GTTTGATCTTAATGCTGTATCCACCTTTGACAAAGGTTAATTACGATAAAATGGGGGATGTTTTTAGAGATAAGAAAGAG
CTTGTTTTTTCTTTGATTCAAAACTGGATTGTTGGTCCACTTTTGATGTTCGCTTTAGCCGTTATTTTCCTTCATGATTA
TCCTGACTACATGGTTGGTTTAATTATGATTGGATTGGCAAGATGTATTGCCATGGTAATTGTGTGGAATGAATTGGCAC
AGGGGAATAATGATTATGCAGCCGGTTTGGTCGCAGTAAATTCTATTTTCCAAATTGTCTTTTATTCCGTTTACGCATAT
GTTTTTATTAGTGTATTGCCTAAATTCTTCGGCATTCAAACTCATGCACTTAACGTTACGATGGGCGAAATTGCTAAAAC
CGTCTTTATTTACTTGGGTATTCCGTTTATTTTAGGAATCGGTTCACGCTATTTGATTATTAAATCCAAGGGCAAAGATT
GGTTTGAAGCTAAGTATGTTCCTAAAATTAGCAGAATAACCACCTGGGCTTTGCTTTTTACTATCGTACTAATGTTTTCG
GTTAAGGGCGTTAAAGTTGTTCAATTGCCGCTTGATGCAGTTAGGGTAGCTGTTCCTTTATTACTATACTTCGTATTAAT
GTTCCTAATTACTTTTTGGATTGCGAAAAAGACACGCACAAGCTATTCAATCTCCGTAACACAAGCCTTTACTGCTTCAA
GCAATAACTTTGAACTTGCAGTGGCTGTAGCCGTTGGTATTTTTGGCTTAAACTCAAGTGAAGCATTTGCGGCCGTAATC
GGTCCCATGGTAGAAGTACCGGTTATGATCCTATTGGTAGATGTGGCACTTTGGATAAAGAGGAGATACTACAAGTAA

Protein sequence :
MNTSKGLSFMDRYMTLWVFLAMALGIVISFVFPSFPKLINSWSVGTTSIPIAIGLILMLYPPLTKVNYDKMGDVFRDKKE
LVFSLIQNWIVGPLLMFALAVIFLHDYPDYMVGLIMIGLARCIAMVIVWNELAQGNNDYAAGLVAVNSIFQIVFYSVYAY
VFISVLPKFFGIQTHALNVTMGEIAKTVFIYLGIPFILGIGSRYLIIKSKGKDWFEAKYVPKISRITTWALLFTIVLMFS
VKGVKVVQLPLDAVRVAVPLLLYFVLMFLITFWIAKKTRTSYSISVTQAFTASSNNFELAVAVAVGIFGLNSSEAFAAVI
GPMVEVPVMILLVDVALWIKRRYYK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 6e-96 56
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 4e-96 56
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 6e-77 54

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LJ0231 NP_964246.1 hypothetical protein BAC0573 Protein 4e-111 64
LJ0231 NP_964246.1 hypothetical protein BAC0004 Protein 9e-80 49