Gene Information

Name : LJ0604 (LJ0604)
Accession : NP_965651.1
Strain : Lactobacillus johnsonii NCC 533
Genome accession: NC_005362
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase component
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1772257 - 1773003 bp
Length : 747 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTAAAGTAGTTCAAGTTCAAAATATTACTAAGACTTATGGTAAAAAAGGTGAAAAACAATACCAAGCTTTAAAGGG
CGTCAGCTTTGATGTGGAACGTGGTGAATTTGTTGGAATCATGGGTGCATCTGGTTCTGGTAAAACCACTTTGTTAAATA
TTTTATCTACATTAGATCAACCTACAACTGGAAATGTATACATTAATGGCCGTGACATTACTGGCTTAAATAAAAATCAA
ATGGCAGACTTTCGTGGTCAAGAAATTGGTTTTATTTTTCAAGATTTCAACTTATTAGAAAACCTAACAAATCGTGAAAA
TATTGCTCTTCCTCTTTCACTTCAAAATGTGAAGAGTAGTCAGATTAATCCTAAAGTGGATAAAATTGCTAAGCGACTAG
GAATTGATCATATTTTAAATAAATATCCAGCAGAAATCTCTGGTGGACAAAAACAACGTGTTGCAGCAGCGCGTGCATTA
GTTCATGAACCAGCTATTCTTTATGGAGATGAACCAACTGGGGCACTTGATTCAAAGAGTGCTACTGAATTACTTGAAAC
AATGAAAGGTCTAAATGAAAATGATAGAGTTTCTATTTTAATGGTTACTCACGATCCATATTCCGCTTCATATGCTAGTC
GAATTCTTTTCATTAAAGATGGTAAGATCGGAAAAGAAATTAAAAAAGATGGTAAAAGTAGAGAAGAATTTTATCAAGAA
ATTATTGCAGAATTAGGTAGACGTTAA

Protein sequence : 
MSKVVQVQNITKTYGKKGEKQYQALKGVSFDVERGEFVGIMGASGSGKTTLLNILSTLDQPTTGNVYINGRDITGLNKNQ
MADFRGQEIGFIFQDFNLLENLTNRENIALPLSLQNVKSSQINPKVDKIAKRLGIDHILNKYPAEISGGQKQRVAAARAL
VHEPAILYGDEPTGALDSKSATELLETMKGLNENDRVSILMVTHDPYSASYASRILFIKDGKIGKEIKKDGKSREEFYQE
IIAELGRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-35 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-35 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-35 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LJ0604 NP_965651.1 ABC transporter ATPase component NC_012469.1.7686878. Protein 1e-43 43
LJ0604 NP_965651.1 ABC transporter ATPase component CP001581.1.gene598.p Protein 8e-38 42
LJ0604 NP_965651.1 ABC transporter ATPase component NC_008702.1.4606598. Protein 2e-35 42
LJ0604 NP_965651.1 ABC transporter ATPase component CP001581.1.gene798.p Protein 2e-36 41