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Name : LJ0676 (LJ0676) Accession : NP_965579.1 Strain : Lactobacillus johnsonii NCC 533 Genome accession: NC_005362 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1686282 - 1687592 bp Length : 1311 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTAGACATTAAAGTAATTCGAGAGAATTTAGACTGGTCAAAGAAAAAATTAGCTACACGAGGAATTAAACCAGAGGA ATTAGATAAATTAGTAGCTATTGATAAAGAAAGACGTGAAGCTTTAACTAAGAGTGAACAATTAAAGCAAAAGCGTAATG AAGTATCTGATCAAATTGCTCAAGCTAAACGCAATAAAGAAGATGCAAGTGATGCTATTAAAGCAATGCGTGAAGTAGGT AAAGAAATTAAGGATTTAGATAAAGAAGTAGAAGATTTAACTCAAAAACAAAACTATATCTTACTTCGTTTACCTAACTT CCCAGCAGACTCAGATCCTATTGGACCTGATGAAAGTTACAATGAAGAAGTGCGTAAGTGGCATGAGCCTACTAAACTTG ATTTTGAACCAAAACCTCACTGGGAAATTGGAACAGAATTGAATATTTTAGACTGGGATACTGCTGCTAAAGTTTCAGGT GCCCGCTTTGTTTATTACAAAGGTGCAGGTGCATTGCTTGAACGTGCAGTTTCAAACTTCTTCTTAGATGAAAATACTAA AGATGGATATACTGAAGTAATTCCACCATACTTAGTTAACGATGCTTCTATGCAAGGAACTGGTCAATTCCCTAAGTTTA CTGAAGATGTTTATACAATTGTAGATAATGATGATCCTGATAAGCCACGTGATTTAACTTTAATTCCAACTGCTGAAGTA CCATTAGTTAATTACTTCCGTGGCAAGATTTTAGATGGAGAGCAATTACCAATTAATGTAACTGCATTCTCTCCAGCATT TAGAAGTGAAGCGGGATCAGCTGGACGTGACACTCGTGGATTAATCAGAATGCACGAATTTAGAAAAGTTGAAATGGTAA AAATTGTTGACGAAGAAAGTTCATGGGATGAATTGGAAAAATTAACCCATAATGCTGAACATTTACTTCAAAAACTTGGT TTACCATATCATGTTGTTGCTCTTTCAACTGGGGATGCAAGTTTTACTAGTGCAAAAACTTATGATCTAGAAGTTTGGAT GCCAGCACAAGATAAGTATCGTGAAATTTCAAGTTGTTCAAACTGTACTGACTTCCAAGCACGTCGTAGTTTGATTCGTT ACAGAGACGAAAATGGTAAACTTCATTTAGCACATACTTTAAATGGTTCTGGTCTAGCTGTAGGTAGAACAGTAGCTGCT ATTTTGGAAAATTACCAAAACGAAGACGGAACTGTAAATGTTCCAGAAGCTTTACAACCATATATGCATGGAATGAAAGT TATTACTAAAGAGCCAAAATTTGGTGAATAA Protein sequence : MLDIKVIRENLDWSKKKLATRGIKPEELDKLVAIDKERREALTKSEQLKQKRNEVSDQIAQAKRNKEDASDAIKAMREVG KEIKDLDKEVEDLTQKQNYILLRLPNFPADSDPIGPDESYNEEVRKWHEPTKLDFEPKPHWEIGTELNILDWDTAAKVSG ARFVYYKGAGALLERAVSNFFLDENTKDGYTEVIPPYLVNDASMQGTGQFPKFTEDVYTIVDNDDPDKPRDLTLIPTAEV PLVNYFRGKILDGEQLPINVTAFSPAFRSEAGSAGRDTRGLIRMHEFRKVEMVKIVDEESSWDELEKLTHNAEHLLQKLG LPYHVVALSTGDASFTSAKTYDLEVWMPAQDKYREISSCSNCTDFQARRSLIRYRDENGKLHLAHTLNGSGLAVGRTVAA ILENYQNEDGTVNVPEALQPYMHGMKVITKEPKFGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-126 | 63 |
