|
Name : LJ1726 (LJ1726) Accession : NP_965531.1 Strain : Lactobacillus johnsonii NCC 533 Genome accession: NC_005362 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2826 EC number : - Position : 1610727 - 1611776 bp Length : 1050 bp Strand : + Note : - DNA sequence : ATGGACTCTTTACATTCTACCATGAACCAGCACGTTAAAGGCAAGCATTTATCATTTGAAGAGCGAGTTATTATTCAATT GCGTTTGAAAGATGGCTATTCTTTGCGTGCAATTGCCCGTGAACTTAACTGTTCTCCTTCTACTATCAGCTATGAGGTTA AGCGTGGCACTGTAAAACTGTATCATGGTAAAGTCAAAAAATATAAGGCTACTCAAGGGCATGATGCATATAAAGCTCAT CGTAAAAATTGTGGGCGCAAATCAGACTTTCTCAGGAAAGCTCAATTCATGCGCTATGTCCACAAGCATTTTTTTAAAGA TGGCTGGTCGCTTGATGTGTGCAGTAATCGTGCTACTGCTGTTGGCGAATTCGCTAGCAGCGATGTTGTCTGCACCAAAA CTCTTTATAATTACGTTGATCAAGGCTTATTAGGAATTTATAATTACGACTTGCCAGAGAAGCTTAAACGCAATACTAAG CTTCATCGTATTCGCAAAAATAAGAAAAAACTTGGCAGAAGCATTGAAGAACGTCCTAAAGAGATCAATAAACGTAATGA ATTCGGTCATTGGGAATGCGATTTAGTTCTCGGACATAAGAGCAAAGATGATGAGGTACTGCTAACCTTATCTGAGCGTA TGAGTCGTGAGTTTTTAATTCTTCGTATTCCTGACAAGACTTCTGTCAGTGTCATGCAGGCCTTTAAAGAACTCCAAAGG CAATACAGCGAACATTGGAATGATATTTTTAAAACCATTACCACTGATAATGGCTCAGAGTTTGCAGATCTTTCCAACCT AGAAAAAGTATCCAATACACTGGTTTACTATGCCCATCCTTACACTTCTTGTGATAAGGGAACAGTTGAAAGACACAATG GTCTTATTCGCAGATTCATTCCTAAGGGAGAAGCAATAGCTAACTATTCTTTACAAGACATCATTAATATTGAAACCTGG TGCAATTCTTTGCCAAGAAAGATACTGGCCTATCATACACCAGATGAAATCTTTGAAAGAGAATTAGATCTAATCTATCA AGCAGCTTAA Protein sequence : MDSLHSTMNQHVKGKHLSFEERVIIQLRLKDGYSLRAIARELNCSPSTISYEVKRGTVKLYHGKVKKYKATQGHDAYKAH RKNCGRKSDFLRKAQFMRYVHKHFFKDGWSLDVCSNRATAVGEFASSDVVCTKTLYNYVDQGLLGIYNYDLPEKLKRNTK LHRIRKNKKKLGRSIEERPKEINKRNEFGHWECDLVLGHKSKDDEVLLTLSERMSREFLILRIPDKTSVSVMQAFKELQR QYSEHWNDIFKTITTDNGSEFADLSNLEKVSNTLVYYAHPYTSCDKGTVERHNGLIRRFIPKGEAIANYSLQDIINIETW CNSLPRKILAYHTPDEIFERELDLIYQAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_0648 | YP_697974.1 | IS1470, transposase | Not tested | Not named | Protein | 2e-76 | 52 |
| CPR_1078 | YP_698400.1 | IS1470, transposase | Not tested | Not named | Protein | 2e-75 | 51 |
| CPR_0314 | YP_697643.1 | IS1470, transposase | Not tested | Not named | Protein | 1e-75 | 51 |
| CPR_0967 | YP_698290.1 | IS1470, transposase | Not tested | Not named | Protein | 1e-75 | 51 |
| CPR_1088 | YP_698410.1 | IS1470, transposase | Not tested | Not named | Protein | 1e-73 | 51 |
| CPR_0379 | YP_697708.1 | IS1470, transposase | Not tested | Not named | Protein | 3e-74 | 51 |
| CPR_0628 | YP_697955.1 | IS1470, transposase | Not tested | Not named | Protein | 1e-74 | 51 |
| CPR_0383 | YP_697712.1 | IS1470, transposase | Not tested | Not named | Protein | 1e-74 | 51 |
| CPR_0321 | YP_697650.1 | IS1470, transposase | Not tested | Not named | Protein | 6e-75 | 51 |
| CPR_0659 | YP_697986.1 | IS1470, transposase | Not tested | Not named | Protein | 3e-50 | 48 |
