Gene Information

Name : LJ1592 (LJ1592)
Accession : NP_965396.1
Strain : Lactobacillus johnsonii NCC 533
Genome accession: NC_005362
Putative virulence/resistance : Unknown
Product : ABC transporter ATPase component
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1125
EC number : -
Position : 1466839 - 1467801 bp
Length : 963 bp
Strand : -
Note : possible glycine betaine/carnitine/choline

DNA sequence : 
ATGATGATTGAATATAAAAATATTTCAAAAAAATACGATGGACAAGAAATCTTAAAAGATGTTTCTTTCGCAGTGAAAAA
AGGAGATATTTTTGTTTTAGTTGGGCCAAGTGGGAGCGGGAAGACAACGTTGCTAAAGATGTTTAACCGGCTTATTGAAC
CAACAAAGGGACAAATTCTTCTAAATGATAAACCAATAAAAGAATATAATTTGCGTAAACTAAGGGAAAAGACAGGGTAT
GTATTGCAAACAGCTAGTTTGTTTCCAAATTTAACTGTTGGTGAAAATATTACAATTGTGTTAGAGCAAGAAGGTGTCGA
TCGCAAAGAACGGCGAAAAAAACAGGAAGAGCTATTAAAATCGGTTGATTTGGATCCAAAATTATATTGTGATCGCAGGC
CGAGTGAACTATCAGGTGGTGAACAACAACGAGTTGGCATTGTTCGGGCTTTAGCAGCGGATCCTGAAGTTGTTTTAATG
GATGAACCTTTTTCTGCTCTTGATCCAGTTGTAAGAAAGCAACTACAAGACTTACTTATTAATTTACATGAACAATTTAA
TAAGACAGTAATGTTTGTAACACATGACATGCAAGAAGCTATTCGTTTAGGAAACACAATTGGAATTTTGCATAAAGGTG
TTTTAGAGCAAGTTGGCAAACCTAGAGAAATTTTAAGACATCCTGCTACAAAATTTGTACAGGAATTTTTTGCAGGAAAT
AGAATTAATCAAAAGCTCGACCTTGAAACTTTATTGAAGAGTGAATTGGGCGTAGATCCACGATTCTATCCTAAAGTGGA
TACCCTTGTTCGTTATCACGTTGATAGCGTAGAGGATTTAATTAAAGATTGTTCTAACCATCCTGATACTCTGTTTGTTG
CAGAGACCAGGTTTGGTGAATTTTTAATTGAGCCAAAAAGAGTTTGGAATTTCTTTTTAAAGTGGGTGGCTGGACATGAT
TAA

Protein sequence : 
MMIEYKNISKKYDGQEILKDVSFAVKKGDIFVLVGPSGSGKTTLLKMFNRLIEPTKGQILLNDKPIKEYNLRKLREKTGY
VLQTASLFPNLTVGENITIVLEQEGVDRKERRKKQEELLKSVDLDPKLYCDRRPSELSGGEQQRVGIVRALAADPEVVLM
DEPFSALDPVVRKQLQDLLINLHEQFNKTVMFVTHDMQEAIRLGNTIGILHKGVLEQVGKPREILRHPATKFVQEFFAGN
RINQKLDLETLLKSELGVDPRFYPKVDTLVRYHVDSVEDLIKDCSNHPDTLFVAETRFGEFLIEPKRVWNFFLKWVAGHD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-47 46
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 8e-48 46