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Name : cbbT1 (RPA4643) Accession : NP_949977.1 Strain : Rhodopseudomonas palustris CGA009 Genome accession: NC_005296 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 5226783 - 5228750 bp Length : 1968 bp Strand : - Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : ATGGCGAATGCGATCCGCTTTCTCGCTATCGACGGTGTCGAGAAGGCGAAGTCCGGCCACCCGGGCATGCCGATGGGCAT GGCCGACGTTGCCACCGTGCTGTTCACCCGCTTCCTGAAGTTCGATCCGGCCGATCCGGCCTGGGCCGACCGCGACCGGT TCGTGCTGTCGGCCGGCCACGGCTCGATGCTGCTGTACGCGCTGCTGCATCTGACCGGCTATCCGGACGTGACGATCGAT CAGCTGAAGTCGTTCCGGCAGTGGGGTTCGAAGACCCCAGGCCATCCGGAATACGGCCACACCCAGGGCGTCGAGACCAC CACCGGCCCGCTCGGCCAGGGGCTTGCGACCTCGGTCGGCATGGCGCTTGCCGAACGCATGATGAATGCACGCTACGGCG ACGCGCTGGTCGATCACCACACCTACGTCATCGCCGGCGACGGCTGCCTGATGGAAGGCGTCAGCCACGAGGCGATCTCG CTGGCCGGCCACCTCAAGCTCAACAAGCTGATCGTGCTGTGGGACGACAACCACATCTCGATCGACGGCGACACCTCGCT GTCGTGCTCGGACGATCAGCTCGCGCGCTTCGCCGCGTCGGGCTGGGCCACCACTCGCGTCGACGGTCATGATCCGGAAG CGGTCGCGGCCGCGATCGAGCAGGCCAAGAAGAGCGACCGTCCGTCGCTGATCGCCTGCCGCACCACGATCGGCTTCGGC TCGCCGAAGGTCGCGGGCACCGAGAAGGCGCACGGCGCCCCGCTCGGCGCCGACGAGGTCGAGAAGACCCGCGCCGCGCT GAACTGGCCGCATCCGCCGTTCGAAATCCCCGATCCGATCCTGGCGCGCTGGCGCGAGGCCGGCGGCCGCGGCAAGGCGG CGCACGAGGCCTGGACCCAGCGTCTGGCAGCGGCCGACGCTGCGACCCGCACCGGCTTCACCGATGCGCTCGCCGGAAAG CTGTCGGCGGACTACGAAGGCGCGCTGCAGGGCCTGATCGCCAAGTTCGACGCCGACAAGCCGACCATCGCCACCCGTCA GGCGTCGCAGCTCACCATCGACGCCATCGTGCCGGCGTCGCCGAACATCCTCGGCGGCTCAGCCGACCTGACGCACTCCA ACCTGACGCATGCCAAGGGCACCGCGTCGGTGAAGCCGGGTGCGTTCGGCGGCTCCTACCTGCACTACGGCATCCGCGAA TTCGGCATGGCGGCGGCGATGAACGGCATCGCGCTGCACGGCGGCTTCGTGCCGTTCGGCGGCACCTTCCTGGTGTTCGC CGACTATAGCCGTCCGGCGATCCGCCTTGCGGCGCTGATGGGCGTCCGCGTCATCCATGTGATGACCCACGACTCGATCG GCCTCGGCGAAGACGGTCCGACCCATCAGCCGGTCGAGCACGTTCCCTCGCTGCGCGCGATCCCGAACGTCCTGGTGTTC CGCCCGGCCGACGCGATCGAAACCGCGCAGGCCTGGGACTGCGCGCTGAAGCAGACCTCGCGTCCGTCGGTGCTGGCGCT GTCGCGCCAGGGCCTGCCGGCGCTGCCGCGTCCGAACGGCGCGACCGGCAACCCGGTGGCGCGCGGCGCTTACGTCGTGG TCGATCCCGGCCAGCGCGACGTCACCCTGATCGCCACCGGCTCGGAAGTGTCGCTGGCGCTGGATGCGGCGTCCAAGCTG GAAGCCGAAGGCATCAAGGCAGCGGTGGTGTCGGCCCCGTGCTTCGAACTGTTCGCCGACCAGGACGACGCGTACCGCGC CAGCGTGCTCGGCACCGCGCCGCGGATCGGCATCGAAGCGGCGCGCGACACCGATTGGCGCCGCTGGATCGGCGATACCG GTGCGTTCGTCGGCATGACCGGGTTCGGTGCCTCGGCGCCGGCGCCGGTTCTGTACCAGAAGTTCGGCATCACCGCGGAC GCGGTGGTGGACGCCGCCAAGGGCGCGATCGCCCGCGGTAAGCACTGA Protein sequence : MANAIRFLAIDGVEKAKSGHPGMPMGMADVATVLFTRFLKFDPADPAWADRDRFVLSAGHGSMLLYALLHLTGYPDVTID QLKSFRQWGSKTPGHPEYGHTQGVETTTGPLGQGLATSVGMALAERMMNARYGDALVDHHTYVIAGDGCLMEGVSHEAIS LAGHLKLNKLIVLWDDNHISIDGDTSLSCSDDQLARFAASGWATTRVDGHDPEAVAAAIEQAKKSDRPSLIACRTTIGFG SPKVAGTEKAHGAPLGADEVEKTRAALNWPHPPFEIPDPILARWREAGGRGKAAHEAWTQRLAAADAATRTGFTDALAGK LSADYEGALQGLIAKFDADKPTIATRQASQLTIDAIVPASPNILGGSADLTHSNLTHAKGTASVKPGAFGGSYLHYGIRE FGMAAAMNGIALHGGFVPFGGTFLVFADYSRPAIRLAALMGVRVIHVMTHDSIGLGEDGPTHQPVEHVPSLRAIPNVLVF RPADAIETAQAWDCALKQTSRPSVLALSRQGLPALPRPNGATGNPVARGAYVVVDPGQRDVTLIATGSEVSLALDAASKL EAEGIKAAVVSAPCFELFADQDDAYRASVLGTAPRIGIEAARDTDWRRWIGDTGAFVGMTGFGASAPAPVLYQKFGITAD AVVDAAKGAIARGKH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 8e-153 | 53 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 2e-145 | 50 |
