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Name : gabD1 (RPA0461) Accession : NP_945814.1 Strain : Rhodopseudomonas palustris CGA009 Genome accession: NC_005296 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 508060 - 509553 bp Length : 1494 bp Strand : + Note : observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished DNA sequence : ATGTCACCCACCGCTGCCGCACGCGCCGCCGATCAAGCCGCCTCTCTGCGCGATCGTCTAAAGGACCCGTCGCTGCTGCG CGAGCAGTGCTATATCGACGGCGCCTGGTCGGGCACGTCGACGATCGCGGTGACTAATCCGGCGAGCGGGCAGACGATCG CCAAGGTGCCGCATCTCGGCGCCGCCGAGGCAACTCAGGCGGTGGAGGCTGCCGCGCAAGCATTTCCGGCCTGGGCGAAG CTCACCGCCAAGCAGCGCTCCAACATCTTGCGCAAATGGTTCGAGCTGATCATCGCCAACCGCGAGGATCTGGCTCTGAT CCTGACCTCCGAGCAGGGCAAGCCGCTCACCGAGGCGCTCGGTGAAGTCGATATCGGCGCCGCCTATGTCGAGTTTTTCG CCGAAGAGGCGCGGCGGGTGTATGGCGAAACCATCCCGACCCAACGCGCCGATGCGCGGCTGATCGCCATCAAGCAGCCG ATCGGTGTCTGCGGCGCGATCACGCCGTGGAACTTCCCGAGCTCGATGATCACCCGCAAAGTCTCGCCGGCGCTGGCGGC GGGCTGCACAGTGGTGCTGAAGCCGGCCGAGGAAACGCCGCTGAGTGCCTTCGCGCTGGCGGCGCTGGCCGAAAAGGCGG GCGTGCCGAAGCGCGTGTTCAACGTCCTCACCGGCGATGCGCCGGCAATTGGAAAGGTACTGTGCGAACATCCGGCCGTC CGGTTCGTCGGTTTCACCGGTTCCACCGAAGTCGGCAAGATCCTCTACAAGCAGGCGTCGGTCGGGGTGAAGAAGCTCGG ATTGGAGCTCGGCGGTAACGCGCCGTTCATCGTGTTCGATGATGCCGATGTCGACGCTGCGGTCGAAGGCGCGATGGTGT CGAAATATCGCAACATGGGCCAGACCTGCGTCTGCGCTAATCGGCTCTACGTGCAGGATGGCGTCTACGACGCGTTCGTC GAGAAGCTCGCCGCCAAGGTCAAGGCGATGAAGGTCGGCGACGGCACCGAGCAGGGCGTCACCCAGGGGCCGCTGATCAA TGAGGCCGCCGTCGAGAAGACCGAGCGGCACATCGCGGATGCGCTATCCAACGGCGCCAAGATCATCACCGGTGGAAAGC GTCATGCGCTCGGCGGCACCTTCTTCGAGCCGACCGTGCTGGCCGATGTCCGGCCCGACGCGCTGGTGGCGCATGAAGAA ACCTTCGGCCCGCTGGCGCCGGTGTTCCGCTTCAAGGACGAAGCCGAAGTGATCAAGCTTGCCAACAACTCGCCGTTCGG CCTCGCCAGCTACTTCTACGCCCGCGATTTGGGCCGCGTCTGGCGCGTTGCCGAGGCGCTGGAGAGCGGCATGGTCGGCG TCAACACCGGCCTGATCACCACCGAAGTCGCCCCGTTCGGCGGCGTCAAGGAATCCGGCCTCGGCCGCGAAGGCTCGCAT CACGGCATCGAAGAATATGTCGAGATTAAATACGTGATGATGGCGGGGATCTGA Protein sequence : MSPTAAARAADQAASLRDRLKDPSLLREQCYIDGAWSGTSTIAVTNPASGQTIAKVPHLGAAEATQAVEAAAQAFPAWAK LTAKQRSNILRKWFELIIANREDLALILTSEQGKPLTEALGEVDIGAAYVEFFAEEARRVYGETIPTQRADARLIAIKQP IGVCGAITPWNFPSSMITRKVSPALAAGCTVVLKPAEETPLSAFALAALAEKAGVPKRVFNVLTGDAPAIGKVLCEHPAV RFVGFTGSTEVGKILYKQASVGVKKLGLELGGNAPFIVFDDADVDAAVEGAMVSKYRNMGQTCVCANRLYVQDGVYDAFV EKLAAKVKAMKVGDGTEQGVTQGPLINEAAVEKTERHIADALSNGAKIITGGKRHALGGTFFEPTVLADVRPDALVAHEE TFGPLAPVFRFKDEAEVIKLANNSPFGLASYFYARDLGRVWRVAEALESGMVGVNTGLITTEVAPFGGVKESGLGREGSH HGIEEYVEIKYVMMAGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-125 | 63 |
