|
Name : kdsB (RPA3694) Accession : NP_949032.1 Strain : Rhodopseudomonas palustris CGA009 Genome accession: NC_005296 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : - Position : 4169473 - 4170210 bp Length : 738 bp Strand : + Note : CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS DNA sequence : ATGACATCTCCTGCCACTCTGGTTCTGATCCCTGCCCGGATGGCCGCTACGCGGCTGCCCGGCAAACCGCTGCTCGACAT CGCTGGGCTGCCGATGGTGGTGCAGGTGCTGCGCCGGGCCCAGGCGGCGGAAATCGGACGGGTGGCGGTGGCGACCGATG CGCCGGAGATCGCCGCCGCGGTGACGGCCCATGGCGGCGAGGTGGTGATGACCCGCGCCGACCATCCCTCCGGATCAGAC CGCATCTTCGAGGCGCTGCAGACGCTGGACCCGGACCGCAAGATCGAAACCGTGATCAACCTGCAGGGCGATTTCCCGAC CATCCGCCCCGAGCAGATCGGCGCGGTGCTGGAGCCGCTCGCCGACCCGGCCGTCGACATCGCCACGCTGGCGGCCGAGA TCCACACCGAGGAAGAGGCCACCAATCCGAACGTGGTGAAGGTGATCGGCTCGCCGCTCGCCGCGGACCGGCTGCGGGCG CTGTATTTCACCCGCGCGACCGCCCCATGGGGCGACGGACCGCGCTACCATCATATCGGCCTGTACGGCTACCGCCGCGC CGCCCTGGAGCGGTTCGTGGCACTGCCCCCTTCCCCACTCGAGCTGCGCGAGAAGCTCGAACAGCTCCGTGCGCTAGAGG CCGGGATGCGGATCGACGTCGGCATCGTCGACACCGTGCCCCGCGGGGTCGATACGCCGGCCGATCTCGAGACCGCACGG CGTGTGCTCGGCGGCTGA Protein sequence : MTSPATLVLIPARMAATRLPGKPLLDIAGLPMVVQVLRRAQAAEIGRVAVATDAPEIAAAVTAHGGEVVMTRADHPSGSD RIFEALQTLDPDRKIETVINLQGDFPTIRPEQIGAVLEPLADPAVDIATLAAEIHTEEEATNPNVVKVIGSPLAADRLRA LYFTRATAPWGDGPRYHHIGLYGYRRAALERFVALPPSPLELREKLEQLRALEAGMRIDVGIVDTVPRGVDTPADLETAR RVLGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 1e-39 | 45 |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 2e-38 | 44 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 2e-38 | 44 |
