|
Name : ureB (RPA3662) Accession : NP_949000.1 Strain : Rhodopseudomonas palustris CGA009 Genome accession: NC_005296 Putative virulence/resistance : Virulence Product : urease subunit beta Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0832 EC number : - Position : 4135562 - 4135867 bp Length : 306 bp Strand : - Note : ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzym DNA sequence : ATGATCCCTGGTGAACTGTTTATCGAAGACGGCGAGATCGAGCTCAACGCCGGCCGCAAGACGGTGACGCTGACGGTGTC GAACACCGGCGATCGGCCGATCCAGGTCGGGTCGCACTATCATTTCTTCGAAACAAACCCGGCGCTAAAATTCGATCGCG ACAAGGCCCGCGGGATGCGGCTCGACATCGCGGCCGGCACTGCGGTGCGCTTCGAGCCCGGCCAGAGCCGCGACGTGCAA CTGGTCGAACTCGCCGGCAAGCGCACCATCTACGGCTTCCGCGGCGACGTGATGGGCAAGCTGTAA Protein sequence : MIPGELFIEDGEIELNAGRKTVTLTVSNTGDRPIQVGSHYHFFETNPALKFDRDKARGMRLDIAAGTAVRFEPGQSRDVQ LVELAGKRTIYGFRGDVMGKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ureB | NP_287087.1 | urease subunit beta | Not tested | TAI | Protein | 2e-29 | 71 |
| ureB | NP_286679.1 | urease subunit beta | Virulence | TAI | Protein | 2e-29 | 71 |
| ureB | YP_003784326.1 | urease subunit beta | Not tested | PiCp 7 | Protein | 3e-26 | 60 |
| ureB | YP_005682175.1 | Urease beta subunit | Not tested | PiCp 7 | Protein | 2e-26 | 60 |
| ureB | YP_005684267.1 | Urease beta subunit | Not tested | PiCp 7 | Protein | 2e-26 | 60 |
| ureB | YP_005686359.1 | Urease beta subunit | Not tested | PiCp 7 | Protein | 2e-26 | 60 |
