Gene Information

Name : RPA3580 (RPA3580)
Accession : NP_948918.1
Strain : Rhodopseudomonas palustris CGA009
Genome accession: NC_005296
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 4046232 - 4047152 bp
Length : 921 bp
Strand : +
Note : -

DNA sequence : 
GTGACGCCCGCGGCCAAGCGGAAAGCTGTCGCGCATCTGCAAACTGCATTCGAGATGAGCGAACGGCGGGCGTGTAAAGC
CATCGGCTGCTGCCGCATGACAGTCAGATATCAGACGAGCCGGAGCGATGATGCCGGGCTGCGCCAACGTATGAGGGCGA
TCGCCCATGAGCGCCGGCGCTTTGGCTATCGGCGCCTCCACGTCCTGCTCAAGCGTGAGGGCTACCTGGTCAATCACAAG
AAGCTGTTCCGGCTGTACCGTGAGGAGAAGCTCACAGTGCGCCGCAGGGGTGGCCGCAAACGGGCCCTCGGCACACGAGC
TCCCATGACAGTGCCGGTGCTCCCGAATGATCGCTGGTCGCTCGACTTCGTGTCGGATCAGATGACCGATGGTCGACGCT
TCCGCATTCTGACTGTGGTCGACGACTGCACCCGCGAGTGCCTGGCGCTGGTGGTCGACACCTCGCTCTCGGGCGCCCGG
GTCGCACGAGAACTGGACCGGCTGGTTGCCGAGCGCGGCAAGCCCAAGATGGTGGTGAGCGACAATGGCAGCGAGTTCAC
CAGCAATGCCATCCTGACATGGGCCGATCAGAGCCGTATCGCCTGGCACTACATTGCGCCGGGAAAACCCATGCAAAACG
CCTTCATCGAGAGCTTCAACGGCCGCCTGCGGGATGAACTGCTGAACGAAACGCTGTTCACCTCGCTGGCCCAGGCCCGC
GTAGCGCTCCGGTGCTGGCGGGCCGACTACAATGATGCACGACCGCACTCACAGCTCGGGTGGCGGACGCCATCCGAGTT
CGCCGCCACCTGCAATCCGCGTCGGGATCTGGCGCTGCGCTATATCGAAAGCTCCACGCCAGCTCCCGCCACCGCCCACA
TGGGCCCATCTAACCACCCGAACGAACTCAGACCTGGATAA

Protein sequence : 
MTPAAKRKAVAHLQTAFEMSERRACKAIGCCRMTVRYQTSRSDDAGLRQRMRAIAHERRRFGYRRLHVLLKREGYLVNHK
KLFRLYREEKLTVRRRGGRKRALGTRAPMTVPVLPNDRWSLDFVSDQMTDGRRFRILTVVDDCTRECLALVVDTSLSGAR
VARELDRLVAERGKPKMVVSDNGSEFTSNAILTWADQSRIAWHYIAPGKPMQNAFIESFNGRLRDELLNETLFTSLAQAR
VALRCWRADYNDARPHSQLGWRTPSEFAATCNPRRDLALRYIESSTPAPATAHMGPSNHPNELRPG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 4e-54 50
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 1e-42 44
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 6e-45 42