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Name : thiC (RPA3577) Accession : NP_948915.1 Strain : Rhodopseudomonas palustris CGA009 Genome accession: NC_005296 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 4042665 - 4044665 bp Length : 2001 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAATATCCGCTCCAATCCCGAGACCACCCGCGCGGCTGTGACCACCGGTGCCCTGCCCTCCTCCAAGAAGATCTACGC CACGCCCGCGAGCGCGCCGGATCTGCGCGTGCCGCTGCGCGAGATCATTCTGAGCGAAGGCGCAGGCGAGCCGAACCTGC CGGTGTACGACACCTCCGGCCCCTACACCGATCCGACCGTCGTGATCGACGTCAACAAGGGCCTGCCGCGTCCGCGCACC GAATGGGTCAAGCAGCGCGGCGGCGTCGAGCAGTATCAGGGCCGCGACATCAAGCCGGAAGACAACGGCAATGTCGGCGC TGCGCACGCGGCCAAAGCCTTCACCGCGCATCACCAGCCGCTGCGCGGTCTCGACTCCCCTCCCCCTCGCGGGGAGGGGT CGGGGGTGGGGGGAGCCACACCGGCAGCGTTTGCGCGGGGTGCGGACCATCCACCAATGATCACCCAATACGAATTCGCC CGCCGCGGCATCATCACCAAGGAGATGATCTACGTCGCCGAGCGCGAAAATTTGGGCCGCAAGCAGCAGCTCGAACGCGC CGAAGCGGCGCTGGCCGATGGTGAATCGTTCGGCGCCGCGGTGCCGGCGTTCATCACGCCGGAATTCGTCCGCGATGAAA TTGCGCGTGGACGCGCGATCATCCCGGCCAATATCAATCACGGCGAACTCGAGCCGATGATCATCGGCCGCAACTTCCTC ACCAAGATCAACGCCAATATCGGCAACTCGGCGGTGACCTCGTCGGTCGAGGAGGAAGTCGACAAGATGGTGTGGGCGAT CCGCTGGGGCGCCGACACCGTGATGGACCTCTCCACCGGGCGCAACATCCACACCACCCGCGAATGGATCTTGCGCAACT CGCCGGTGCCGATCGGCACCGTGCCGATCTATCAGGCGCTGGAGAAGTGCGAAGGCGATCCGGTCAAGCTCACCTGGGAG CTGTACAAGGACACGCTGATCGAGCAGGCCGAACAGGGCGTCGATTACTTCACCATCCACGCCGGCGTGCGGCTGCAATA CATCCACCTCACCGCCAGCCGCGTCACCGGCATCGTGTCGCGCGGCGGCTCGATCATGGCGAAGTGGTGCCTGGCGCATC ACAAGGAGAGCTTCCTCTACACGCATTTCGACGAGATCTGCGACCTGATGCGCAAATACGACGTGTCGTTCTCGCTCGGC GACGGCCTGCGGCCGGGCTCGATCGCGGATGCCAACGACCGCGCCCAGTTCGCCGAACTGGAGACGCTCGGCGAACTCAC CAAGATCGCCTGGGCCAAGGGCTGCCAGGTGATGATCGAAGGCCCCGGCCACGTGCCGATGCACAAGATCAAGATCAACA TGGACAAGCAGCTCAAAGAATGCGGCGAGGCGCCGTTCTATACCTTGGGCCCGCTGACCACCGACATCGCGCCGGGCTAT GATCACATCACCAGCGGCATCGGCGCCGCGATGATCGGCTGGTTCGGCTGCGCGATGCTGTGCTACGTCACGCCGAAGGA GCATCTCGGCCTCCCCGACCGCAACGACGTCAAGACCGGCGTGATCACCTACAAGATCGCCGCCCACGCCGCCGACCTCG CCAAGGGCCACCCCGCCGCGCAGCTCCGCGACGATGCATTGAGCCGCGCCCGCTTCGAATTCCGCTGGCAGGACCAGTTC AACCTCGGCCTCGATCCGGACACGGCGCAAGCCTTCCACGACGAGACCCTGCCCAAGGACGCCCACAAGGTCGCGCATTT CTGCTCGATGTGCGGCCCGAAATTCTGCTCGATGAAGATCACCCAGGACGTGCGCGACTACGCCGCCGGCCTCGGCGACA ACGAGAAAGCCGCCCTCTACCCGGTCGGCCACGCCGGCATGACGATCTCCGGCACCATCGAAGACGGCATGGCCCAGATG AGCGCCAAGTTCAAAGAGATGGGAAGCAGCGTGTATCTCGACGCCGAGAAGGTGAAAGAGAGCAACAAGGCGCTGTCGTA A Protein sequence : MNIRSNPETTRAAVTTGALPSSKKIYATPASAPDLRVPLREIILSEGAGEPNLPVYDTSGPYTDPTVVIDVNKGLPRPRT EWVKQRGGVEQYQGRDIKPEDNGNVGAAHAAKAFTAHHQPLRGLDSPPPRGEGSGVGGATPAAFARGADHPPMITQYEFA RRGIITKEMIYVAERENLGRKQQLERAEAALADGESFGAAVPAFITPEFVRDEIARGRAIIPANINHGELEPMIIGRNFL TKINANIGNSAVTSSVEEEVDKMVWAIRWGADTVMDLSTGRNIHTTREWILRNSPVPIGTVPIYQALEKCEGDPVKLTWE LYKDTLIEQAEQGVDYFTIHAGVRLQYIHLTASRVTGIVSRGGSIMAKWCLAHHKESFLYTHFDEICDLMRKYDVSFSLG DGLRPGSIADANDRAQFAELETLGELTKIAWAKGCQVMIEGPGHVPMHKIKINMDKQLKECGEAPFYTLGPLTTDIAPGY DHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPDRNDVKTGVITYKIAAHAADLAKGHPAAQLRDDALSRARFEFRWQDQF NLGLDPDTAQAFHDETLPKDAHKVAHFCSMCGPKFCSMKITQDVRDYAAGLGDNEKAALYPVGHAGMTISGTIEDGMAQM SAKFKEMGSSVYLDAEKVKESNKALS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 63 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 63 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 61 |
