Gene Information

Name : rph (RPA0329)
Accession : NP_945682.1
Strain : Rhodopseudomonas palustris CGA009
Genome accession: NC_005296
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : -
Position : 356701 - 357414 bp
Length : 714 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGCGGCCGAGCCGCCGTGCGCCCGACGAATTGCGCGCCGTGTCGCTGGAACGCGGCGTGGTCAAATATGCCGAGGGCTC
CTGCCTGGTGAAGTTCGGCGACACCCATGTACTGGTGACCGCCACCCTGGAAGAACGGCTGCCGCCGTGGCTGAAGGGGC
AGGGCCGCGGCTGGGTGACGGCCGAATACGGCATGCTGCCGCGCGCCACCCTTGAGCGCACCCGCCGCGAAGCCTCCGCC
GGCAAGCAGAACGGCCGCACCGTCGAGATTCAGCGCCTGATCGGCCGCTCGCTGCGCACCATCGTCGATCTCGAGGCGCT
CGGCGAGCGCCAGATCACGGTGGACTGCGACGTGCTGCAGGCCGATGGCGGCACCCGGACCGCCTCGATCACCGGCGCCT
GGGTTGCGCTTGCGGACTGCCTGAACTGGATGAAGGCCCGCAACATGATCAAGGGCCAGGTGCTTCGCGACAACGTCGCG
GCGATCTCCTGCGGGATCTACAACGGTACGCCGGTGCTCGATCTCGACTACGCCGAGGATTCCGAGGCCGAGACCGACGC
CAACTTCGTGATGACAGGCGACGGCCGTCTGGTCGAAGTGCAGGGCACCGCGGAACGCACTCCGTTCTCGCAGGACGAGT
TCCTCCAGCTGATGGCGCTGGCGCAGAAGGGCGTCGCCCGGCTGGTGGACCTGCAGAAAATGGCGGTTGGGTGA

Protein sequence :
MRPSRRAPDELRAVSLERGVVKYAEGSCLVKFGDTHVLVTATLEERLPPWLKGQGRGWVTAEYGMLPRATLERTRREASA
GKQNGRTVEIQRLIGRSLRTIVDLEALGERQITVDCDVLQADGGTRTASITGAWVALADCLNWMKARNMIKGQVLRDNVA
AISCGIYNGTPVLDLDYAEDSEAETDANFVMTGDGRLVEVQGTAERTPFSQDEFLQLMALAQKGVARLVDLQKMAVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 8e-51 50