Gene Information

Name : RPA3260 (RPA3260)
Accession : NP_948599.1
Strain : Rhodopseudomonas palustris CGA009
Genome accession: NC_005296
Putative virulence/resistance : Resistance
Product : cation-transporting P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 3668874 - 3671003 bp
Length : 2130 bp
Strand : -
Note : -

DNA sequence :
ATGGCGACCGACGCCTACAGAATTCGCGTAGAAGGCATGGATTGCGCCTCCTGCGCGCTCAAGATCGAGACCGCGATGCA
GCGGCTGTCGGGTGTCGCGGATGTCCGCGTCAGCTACTCGGCCGGCACCTTGGCGCTTCGGTTCGATCAGGACAGAATCT
CGCCGAGCACAATCGACGATGAGCTTTGCTCGCTCGGTTTTCGACCGCAGGCAATTGCTTCGTCGCCAAGCAGCATCGCG
ACCGAACGAAAACGACTGCCATGGTGGCAGGACGCGAAGCTGCAATCGGTCATGATCGCAGCGGCGGTTTTTGCTCTGGC
GTTCGCCTTATCGCAGCTCTTTCCGGCCTTCGAGCGATGGCTCTATTCCGCGGCGGCCGCGATCTGTCTGATCCCGATCG
CTCGCCGGGCCTTGATCGGCGCGCGTTCGGGATCTCCCTTCAGCATCGAAACGCTGATGAGCGTTGCGGCCGTCGGTGCG
GTCATGATCGGCGAGGCCGAGGAAGCGGCCGTGGTCATCGTTCTGTTCGGTGTTGGCGAATGGCTGGAGACTTTCGCGGC
GGGGCGCGCACGAGCCGGCATTGAATCGCTGATCGACGTGGTGCCGCGCACCGCGAGGCGACTGCGCGATGGTTCAGACG
AAGTCGAGGAGATCCCGGCTGCCGACCTGATGATCGGCGATGTGGTGGTGGTGCGTCCCGGCGACCGCATCCCGTCGGAC
GGCAAGGTTATCGACGGCCACTCTGACGTGAACGAAGCACCGATCACCGGCGAGTCCGTGCCGGTCGCCAAGGCGGTCGG
CGATCACGTCTATGCCGGCAGCATCAACGCGAACGGCGAGCTGCGCATCGAGACGACGAATGCGGCGGCCGACAACACGA
TCGCGCGCATCATCCACCTCGTCGAACAAGCGCAGGAGACCAAAGCGCCGACGGAGCGGATGATCGATCGGCTCAGCCGG
TGGTACACGCCCGCCGCCATGCTGGTGGCGCTCCTTGTCATCATCGTGCCACCGCTCGGCTTCGGCGAGGATTGGGCGAC
CTGGATCTACCGCGGACTCGCCACGTTGCTGATCGCCTGCCCATGTGCACTTGTCATTTCGACACCGGCGGCCATCGCTT
CCGGCCTTGCGGCGGGCGCCCGCAAAGGGCTGCTCATCAAGGGCGGTGCGGTGCTGGAAACGCTCGGTAAGGTGAAGACC
GTGGCCTTCGACAAGACCGGTACGCTGACGCTGGGGCAGCCTCAGGTGACCGACGTGGTTTCCGTCATCGGCCAGGACGA
CGCTGTGCTCGCGCGCGCGGCCGCGGTCGAAGGCAACACCAGTCACCCGATCGGACAGGCGATTGTCCGCGCCGCGAAGG
CGCGCGCACTGCAGACCCCCATCGTGTTTGGCGGGAGTCAGGCGGTGCCAGGCAAGGCGATCTCCGCGCGGCTGAAAGAC
GGCTTTGCCTTCGTCGGGTCTCCGCACTTTGCCGCCGAGCGGACCACGATCCCGCCGGAGCTTGCGACGACGATCTCCGG
TCTCGAGCACGAAGGTAAGACGGTCGTGGTGCTCATCTCTGGCAAGACGTGCGAGGGAGTGATTGCGCTGCGCGACGAGC
CGCGCCCGGATGCGGCAGGAGCTTTGCGGCAACTGACGTCCAAAGGCATCGCGGTGGTTATGCTGACGGGCGACAACGCG
CGAACCGCTCAGGCCATCGCGGGCCAACTCGGCATCGAGGCTCGCGCTGAGCTTCTGCCCGACGCCAAGCTGGCCGAGAT
TCGTCGCCTGAAGGCAGTGTCGCCCGTGGCGATGGTTGGCGACGGCATCAATGACGCGCCTGCGCTCGCGGCCGCTTCCG
TCGGCATCGCCATGGGGGGAGGAACGGACGTGGCGCTGGAGACCGCCGACGCGGCGCTGCTGAATGATCGCGCCCATGGC
GTCGCGGAATTGATCGCGCTGTCGCAGGCCACGCTCGGCAACATCTGGCAGAACATCTCGATCGCGCTCGGGCTGAAAGC
GGTGTTCCTCGCCACCAGCCTCCTAGGCGTGACGACGTTGTGGATGGCGATCCTCGCCGACACCGGCGCCACCGTCCTGG
TCACCGCGAACGCCCTCAGATTGCTGCGGTGGCGGGCGTCGGCCTCATGA

Protein sequence :
MATDAYRIRVEGMDCASCALKIETAMQRLSGVADVRVSYSAGTLALRFDQDRISPSTIDDELCSLGFRPQAIASSPSSIA
TERKRLPWWQDAKLQSVMIAAAVFALAFALSQLFPAFERWLYSAAAAICLIPIARRALIGARSGSPFSIETLMSVAAVGA
VMIGEAEEAAVVIVLFGVGEWLETFAAGRARAGIESLIDVVPRTARRLRDGSDEVEEIPAADLMIGDVVVVRPGDRIPSD
GKVIDGHSDVNEAPITGESVPVAKAVGDHVYAGSINANGELRIETTNAAADNTIARIIHLVEQAQETKAPTERMIDRLSR
WYTPAAMLVALLVIIVPPLGFGEDWATWIYRGLATLLIACPCALVISTPAAIASGLAAGARKGLLIKGGAVLETLGKVKT
VAFDKTGTLTLGQPQVTDVVSVIGQDDAVLARAAAVEGNTSHPIGQAIVRAAKARALQTPIVFGGSQAVPGKAISARLKD
GFAFVGSPHFAAERTTIPPELATTISGLEHEGKTVVVLISGKTCEGVIALRDEPRPDAAGALRQLTSKGIAVVMLTGDNA
RTAQAIAGQLGIEARAELLPDAKLAEIRRLKAVSPVAMVGDGINDAPALAAASVGIAMGGGTDVALETADAALLNDRAHG
VAELIALSQATLGNIWQNISIALGLKAVFLATSLLGVTTLWMAILADTGATVLVTANALRLLRWRASAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 2e-102 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPA3260 NP_948599.1 cation-transporting P-type ATPase BAC0461 Protein 3e-123 48
RPA3260 NP_948599.1 cation-transporting P-type ATPase BAC0298 Protein 1e-95 46
RPA3260 NP_948599.1 cation-transporting P-type ATPase BAC0092 Protein 9e-80 44
RPA3260 NP_948599.1 cation-transporting P-type ATPase BAC0183 Protein 2e-70 41
RPA3260 NP_948599.1 cation-transporting P-type ATPase BAC0124 Protein 3e-77 41