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Name : RPA3179 (RPA3179) Accession : NP_948518.1 Strain : Rhodopseudomonas palustris CGA009 Genome accession: NC_005296 Putative virulence/resistance : Unknown Product : deoxyribodipyrimidine photolyase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0415 EC number : - Position : 3586798 - 3588249 bp Length : 1452 bp Strand : + Note : - DNA sequence : GTGCTGACACCTGCCAGCTCCCGCCCCCTCATCGTCTGGTTTCGTGACGATCTCCGTCTTGCCGATCATCCGGCGTTGCA CGCCGCCGCGCAATCCGGTGCGCCTGTGCTGTGCGTCTATGTGCTCGACGAGGTGAGCGACGACGTGCGGGCCCTTGGCG GCGCCGTGCGGTGGTGGCTGGCGCAATCGCTTCGCGCGCTGGAGTCCGAGCTTCGCGCTTTGGGCGGAGCGCTGATCCTG CGGCGGGGGCCGACCGCCGCGGTGCTGGCCGAGCTGGCGCAGCAGCACGATGCGGCGGCGGTGCATTGGAACGAAATCGA GATCGCTGCGCATCGGGCGGTCGCCGATGCGCTGGCCGACGCGCTCACGGTGGCCGGCATCGCGTATCACCGCCACCGCG GCGATACGCTGGTGGAGCCGAGTGCGATCCGCAGCAAGGACGGCCGCGGCATGCGGGTGTTCACGCCGTTCTGGCGGCGT GTGCTCAGCCTCGGCGATCCACCGCAGCCCCTGCCCCGCCCGACGACGTTGCGGCCGGCGCCGGCGGTGCCGACCGAACA ACTCAGCGACTGGCAACTCGAACCAACGGCACCGGACTGGGCCGGCGGCCTGCGCCAAACCTGGACGCCGGGCGAGGCTG CCGCGCAGACGCGCCTCGCCGCTTTCCTCGCCATGCAGCCCGGCTATGCCGAGGGTCGCGACTATCCGGATCGGCACATC ACCTCCGGCCTGTCGCCGCATCTGCGGTTCGGCGAAATCAGCCCACGCCAGGTCTGGTACGCCGCGCGCTTTGCCGCTGC CGAGCGGCCGGCGATCGCGCCGGACATCGACAAGTTCCTGAGCGAGGTCGGCTGGCGCGAGTTCTGCCGGCACCTGCTCT TCGACCATCCCGACCTTGCGAGCCGCAATCTGCAGCCGGCATTCGACGCCTTCCCGTGGCAGAGCGACGACGCTGTGCTG ACCGCCTGGCAGCGCGGCCGCACCGGCTATCCGATCGTCGACGCCGGAATGCGCGAGCTGTGGCACTCCGGGGTGATGCA TAATCGCGTCCGCATGGTCGTCGGCTCGTTCCTGGTCAAGCACCTGCTGATCGACTGGCGGCTCGGCGAACAGTGGTTCT GGGACACGCTGGTGGACGCCGACCCCGGCAGCAATCCCGGTAACTGGCAGTGGGTGGCGGGCTGCGGCGCCGATGCGGCA CCGTATTTCCGCGTGTTCAACCCGGTCCTGCAAAGCGAGAAGTTCGACGCGGGTGGCGCCTACATCCGGCGCTGGGTGCC CGAGCTGGCCAGGCTGCCGAACGACCTGATCCACCAGCCGTGGACCGCGACGCCGCTCGAACTCGCCGCCGCCGGCATCA AGCTCGGCGGCAACTACCCGGGACCGATCGTCGACCACAAAACCGGCCGGCAGCGGGCGCTTTCGGCCTATGCCGAGCTG CGTCAGCGTTGA Protein sequence : MLTPASSRPLIVWFRDDLRLADHPALHAAAQSGAPVLCVYVLDEVSDDVRALGGAVRWWLAQSLRALESELRALGGALIL RRGPTAAVLAELAQQHDAAAVHWNEIEIAAHRAVADALADALTVAGIAYHRHRGDTLVEPSAIRSKDGRGMRVFTPFWRR VLSLGDPPQPLPRPTTLRPAPAVPTEQLSDWQLEPTAPDWAGGLRQTWTPGEAAAQTRLAAFLAMQPGYAEGRDYPDRHI TSGLSPHLRFGEISPRQVWYAARFAAAERPAIAPDIDKFLSEVGWREFCRHLLFDHPDLASRNLQPAFDAFPWQSDDAVL TAWQRGRTGYPIVDAGMRELWHSGVMHNRVRMVVGSFLVKHLLIDWRLGEQWFWDTLVDADPGSNPGNWQWVAGCGADAA PYFRVFNPVLQSEKFDAGGAYIRRWVPELARLPNDLIHQPWTATPLELAAAGIKLGGNYPGPIVDHKTGRQRALSAYAEL RQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| DIP0113 | NP_938509.1 | riboflavin biosynthesis protein | Not tested | Not named | Protein | 5e-63 | 42 |
| CD241_0111 | YP_005124380.1 | putative riboflavin biosynthesis protein | Not tested | Not named | Protein | 5e-64 | 42 |
