Gene Information

Name : hslU (RPA0306)
Accession : NP_945659.1
Strain : Rhodopseudomonas palustris CGA009
Genome accession: NC_005296
Putative virulence/resistance : Unknown
Product : ATP-dependent protease ATP-binding subunit HslU
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1220
EC number : -
Position : 335995 - 337296 bp
Length : 1302 bp
Strand : -
Note : heat shock protein involved in degradation of misfolded proteins

DNA sequence :
ATGACCGACTTTTCCCCCCGTGAAATCGTCTCCGAACTCGACCGCTTCATCGTCGGCCAGGCCGACGCCAAGCGCGCGGT
CGCCATCGCGCTGCGCAATCGCTGGCGGCGGCTGCAGCTCGAAGGTAGCTTGCGCGAAGAGGTGCTGCCGAAAAACATCC
TGATGATCGGCCCGACCGGCGTCGGCAAAACCGAGATCGCGCGGCGGCTCGCCAAGCTCGCCGGCGCACCGTTCCTCAAG
GTCGAGGCGACGAAGTTCACCGAGGTCGGCTATGTCGGCCGCGACGTCGAGCAGATCATCCGCGATCTGGTCGAGGTCGC
GATCGCGCAGGTGCGCGAGAAAAAGCGCAAGGACGTGCAGGCGCGCGCCCAGGTCGCCGCCGAGGAACGCGTGCTCGATG
CACTGGTCGGGCCCGGCTCGGGTCCGGCGACGCGCGACTCGTTCCGCAAGAAGCTGCGCGCCGGCGAACTCAACGACAAG
GAAATCGAGATCGAGACCCAGGCTGGTTCCGGCTCGCCGATGTTCGAGATTCCCGGCATGCCGGGCGCGCAGATCGGCGC
GGTCTCGCTCGGCGACATCTTCGGCAAGATGGGCGGCCGCACCAAAAAGCGGCGGCTGACAGTGGCCGACTCCCACGAGA
TCCTGGTCAACGAAGAAGCCGACAAGCTGCTCGACACTGATCAGCTGGTGCAGGAAGCGATCGCTGCGGTGGAGAACAAC
GGCATCGTGTTCCTGGACGAGATCGACAAGATCTGCGTGCGCGACGGCCGCAGCGGCGGCGAAGTCTCGCGCGAAGGCGT
GCAGCGCGATCTGTTGCCGCTGATCGAAGGCACCACGGTGTCGACCAAGCACGGGGCAGTGAAGACCGAGCACATCCTGT
TCATCGCCTCAGGCGCGTTCCACATCGCCAAACCCTCGGACCTGCTGCCCGAACTGCAAGGCCGGCTCCCTATCCGCGTC
GAACTCAATGCGCTCAGCCGCGACGACATGCGCCGCATTCTGACCGAGCCGGAAGCGTCGTTGATCAAGCAATATGTGGC
GCTGATGAAGACCGAAGGCGTGACGCTGGACTTCTCCGACGACGCCATCGACGCACTGGCCGATGTGGCAGTGGCGGTGA
ACTCCACCGTCGAGAACATCGGCGCACGCCGGCTGCAGACGGTGATGGAGCGCGTCCTCGACGAGATCTCGTTCGTCGCT
CCCGACCGCCACGGCGAGACCTTCCGGGTCGATGCGGACTACGTGAAGACCAATGTCGGGGACCTGGCCAAGAACACCGA
TCTGAGCCGGTTTATCTTGTAA

Protein sequence :
MTDFSPREIVSELDRFIVGQADAKRAVAIALRNRWRRLQLEGSLREEVLPKNILMIGPTGVGKTEIARRLAKLAGAPFLK
VEATKFTEVGYVGRDVEQIIRDLVEVAIAQVREKKRKDVQARAQVAAEERVLDALVGPGSGPATRDSFRKKLRAGELNDK
EIEIETQAGSGSPMFEIPGMPGAQIGAVSLGDIFGKMGGRTKKRRLTVADSHEILVNEEADKLLDTDQLVQEAIAAVENN
GIVFLDEIDKICVRDGRSGGEVSREGVQRDLLPLIEGTTVSTKHGAVKTEHILFIASGAFHIAKPSDLLPELQGRLPIRV
ELNALSRDDMRRILTEPEASLIKQYVALMKTEGVTLDFSDDAIDALADVAVAVNSTVENIGARRLQTVMERVLDEISFVA
PDRHGETFRVDADYVKTNVGDLAKNTDLSRFIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslU YP_003728753.1 heat shock protein HslU Not tested cag PAI Protein 1e-90 47