Gene Information

Name : glnA (RPA2967)
Accession : NP_948308.1
Strain : Rhodopseudomonas palustris CGA009
Genome accession: NC_005296
Putative virulence/resistance : Virulence
Product : glutamine synthetase type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 3360870 - 3362279 bp
Length : 1410 bp
Strand : +
Note : observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished

DNA sequence :
ATGACGACCGCTAAAGAAGTCCTGAAATCCATCAAGGACAACGACGTGAAATACGTCGATCTGCGTTTCACCGATCCGCG
CGGCAAGTGGCAGCATGTCACCTTCGACGTGTCGATGATCGACGAGGAGATCTTCTCCGAAGGCACCATGTTCGACGGCT
CCTCGATCGCCGGTTGGAAGGCGATCAACGAGTCCGACATGACGCTGATGCCCGATCCGGCGACCGCCACGATCGATCCG
TTCTTCGCAGAGACCACCATGGTGATCACCTGCGACATCCTCGAGCCGTCGACCGGCGAGCCCTACAACCGCGACCCGCG
CGGCATCGCCAAGAAGGCGGAAGCCCAGGTCAAGGCGCTCGGCATCGGTGACAGCGTGTTCGTCGGCCCCGAAGCCGAGT
TCTTCGTGTTCGACGACGTGCGCTATTCGGCGAGCCCGTACAACACCGGCTTCAAGCTGGACTCGTCGGAACTGCCGACC
AACTCGGACACCGAGTACGAAGGCGGCAACCTCGGCCACCGCATCCGCACCAAGGCCGGTTACTTCCCGGTGCCGCCGCA
GGACTCCGTGCAGGACATGCGCTCGGAGATGCTCGGCGCGATGGCCAAGATGGGCGTCAAGGTCGAGAAGCATCACCACG
AAGTCGCTTCGGCCCAGCACGAGCTCGGCATGAAGTTCGACACCCTGACCCACATGGCCGACCAGATGCAGATCTACAAG
TACTGCATCCATCAGGTCGCCCACATCTACGGCAAGACCGCGACCTTCATGCCGAAGCCGGTGTTCGGCGACAACGGCTC
GGGCATGCACGTCCACCAGTCGATCTGGAAGGACGGCAAGCCGACCTTCGCCGGCAACAAGTACGCCGACCTGTCGGAAA
CCTGCCTCCACTACATCGGCGGCATCATCAAGCACGCCAAGGCGATCAACGCCTTCACCAACCCGTCGACCAACTCCTAC
AAGCGTCTGGTCCCGGGCTATGAAGCGCCGGTGCTGCTGGCCTACTCGGCCCGCAACCGCTCGGCCTCGTGCCGTATCCC
CTACACCACCTCGCCGAAGGCCAAGCGCGTCGAAGTCCGCTTCCCGGACCCGATGGCCAATCCGTATCTCGCCTTCGCGG
CGATGCTGATGGCCGGCCTCGACGGCATCAAGAACAAGATCGATCCGGGTCCGGCGATGGACAAGGACCTGTACGATCTG
CCGAAGGAAGAGCTGAAGCAGATCCCGACCGTTTGCGGCAGCTTGCGCGAAGCGCTCGAGAACCTCGACAAGGACCGCGC
CTTCCTCAAGGCCGGCGGCGTGTTCGATGACGACTTCATCGACGCCTTCATCGAGCTGAAGATGACCGAAGTGGCGCGGT
TCGAAATGACCCCGCACCCGGTCGAGTTCGAGATGTACTACTCGTACTAA

Protein sequence :
MTTAKEVLKSIKDNDVKYVDLRFTDPRGKWQHVTFDVSMIDEEIFSEGTMFDGSSIAGWKAINESDMTLMPDPATATIDP
FFAETTMVITCDILEPSTGEPYNRDPRGIAKKAEAQVKALGIGDSVFVGPEAEFFVFDDVRYSASPYNTGFKLDSSELPT
NSDTEYEGGNLGHRIRTKAGYFPVPPQDSVQDMRSEMLGAMAKMGVKVEKHHHEVASAQHELGMKFDTLTHMADQMQIYK
YCIHQVAHIYGKTATFMPKPVFGDNGSGMHVHQSIWKDGKPTFAGNKYADLSETCLHYIGGIIKHAKAINAFTNPSTNSY
KRLVPGYEAPVLLAYSARNRSASCRIPYTTSPKAKRVEVRFPDPMANPYLAFAAMLMAGLDGIKNKIDPGPAMDKDLYDL
PKEELKQIPTVCGSLREALENLDKDRAFLKAGGVFDDDFIDAFIELKMTEVARFEMTPHPVEFEMYYSY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 2e-107 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA NP_948308.1 glutamine synthetase type I VFG1399 Protein 3e-107 51