Gene Information

Name : RPA2643 (RPA2643)
Accession : NP_947985.1
Strain : Rhodopseudomonas palustris CGA009
Genome accession: NC_005296
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 3007305 - 3008927 bp
Length : 1623 bp
Strand : -
Note : observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished

DNA sequence :
ATGACCGCGCCCGCAGTTCTCACGCTCGACAAACTCAGCGTCCGACTGCCCGCCGGCGCCGACCGCAGCCATGCCGTGCG
CGACGCATCGCTGATGATCGCCGCCGGCGAAATCCTTTGCGTGGTCGGCGAATCCGGCTCCGGCAAATCGATCATGGCGA
ACGCCGTGATGCAGCTCCTACCCGGCGGCGTCACGCTCGACGGCGGCCGAGTGCTGTTCGAGGGCCGTGACCTTGCGCAG
GCCAGCGCCGCGGAGATGCGCAAGGTTCGCGGCGCAGGCATCGCCATGGTGTTTCAGGAGCCGATGACCGCGCTTAATCC
GCTGCGCACCATCGGTGATCAGATCGGCGAGATGTTCTCGATCCACACCGATCTGTCGAAGCGAGACATCAGGTCCAAGG
TGCTTGCGCTGCTGACCGACGTGCGCATTCCCGATCCGGCGCGTGCCGCCGGCGCGTATCCGCACGAACTCTCCGGTGGC
CAGCGCCAGCGCGCCATGATCGCGATGGCGCTCGCGCTCGATCCTAAGTTGCTGATCGCCGACGAGCCAACGACTGCGCT
CGACGTCACCACACAAGCGCAGATCCTCACTCTGATCCGCGAACTACAAAGCCGGCGCAACACTGCGGTGCTTTTCATCA
CCCATGATTTCGGCGTCGTCGCCGAGATCGCCGATCGCGTCGTGGTGATGCAGCACGGCGTCATCGTCGAGCAGGGCCAG
GCCGATGACGTGCTGAACCGGCCGCAGCACGCTTATACGCGGCAACTGATCGCGGCGGTGCCGCCGCTGACCGCCCCGCC
GCCGCGTCCATTTGGCAGCGACACGATCCTGAGCATCGACAACGTGTCGAAGACGTTCCGCACCGGTGGCTTTCTCGGCC
GCGGCGCGCGCGTCACCGACGCGGTGAAGAACGTCTCGCTGAAATTGCCGAAGGGAGCGACGCTCGGCATCGTTGGCGAG
AGCGGCTCCGGCAAGTCGACGCTGGCGCGCTGCATCATCCGCCTGCTCGATCCGGACGCGGGCTCGATCCTGCTCGACGG
CCGTGACTGGGCGACGATGCCGCGCGAGCAGGTGCGGCGCGAAACGCGCCACATGCAGATGGTGTTTCAGGACCCGTTCG
CTTCGCTCAATCCGCGGCACAAGGCCGAGGAATTGGTCGCGCAAGGCCCGATCATCCACGGCACGCCGCGCAAGCAGGCA
ATCGCCGAGGCGCGCAAACTGTTCGAGTTGGTCGGGCTGGATCCCGCCGCCGGCGACCGGCTGCCGCACGAATTCTCCGG
CGGTCAGCGCCAGCGGATCGGCCTCGCCCGCGCGCTGGCGCTGAAGCCCGACGTGCTGATCGCGGATGAAGCCGTATCGG
CGCTCGACGTTTCGGTGCAGGCGCAGGTTCTCAAGCTGCTGACCGACTTGCGCGAGCAACTTGGGCTGTCGATTATCTTC
ATCACCCACGACCTGCGCGTCGCCGCGCAGATCTGCGATCTCGTCGCCGTGATGAAGGACGGCGCAGTCGTCGAGCACGG
CCCCGCCGGTGACGTCTTCAACGCCCCGCAGCACCCCTACACGCAAGCCCTGCTCGCCTCGATCCCGGGCGGAGATTTCG
CGCGCTGCCACGCGCTGACCTAG

Protein sequence :
MTAPAVLTLDKLSVRLPAGADRSHAVRDASLMIAAGEILCVVGESGSGKSIMANAVMQLLPGGVTLDGGRVLFEGRDLAQ
ASAAEMRKVRGAGIAMVFQEPMTALNPLRTIGDQIGEMFSIHTDLSKRDIRSKVLALLTDVRIPDPARAAGAYPHELSGG
QRQRAMIAMALALDPKLLIADEPTTALDVTTQAQILTLIRELQSRRNTAVLFITHDFGVVAEIADRVVVMQHGVIVEQGQ
ADDVLNRPQHAYTRQLIAAVPPLTAPPPRPFGSDTILSIDNVSKTFRTGGFLGRGARVTDAVKNVSLKLPKGATLGIVGE
SGSGKSTLARCIIRLLDPDAGSILLDGRDWATMPREQVRRETRHMQMVFQDPFASLNPRHKAEELVAQGPIIHGTPRKQA
IAEARKLFELVGLDPAAGDRLPHEFSGGQRQRIGLARALALKPDVLIADEAVSALDVSVQAQVLKLLTDLREQLGLSIIF
ITHDLRVAAQICDLVAVMKDGAVVEHGPAGDVFNAPQHPYTQALLASIPGGDFARCHALT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-79 44
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 3e-79 44
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-79 44
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-79 44
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 1e-95 42