Gene Information

Name : RPA2153 (RPA2153)
Accession : NP_947498.1
Strain : Rhodopseudomonas palustris CGA009
Genome accession: NC_005296
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 2423788 - 2425218 bp
Length : 1431 bp
Strand : +
Note : observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished

DNA sequence :
ATGGTCAACCGCATGCAGTTCTACATCGATGGCGCCTGGGTCGATCCCGTCGTCAAGAAGTCGACGCCGGTCGTCAATCC
CGCCACCGAAGAGGCGATGTATGAGGTTGCGCTCGGCTCCAAGGCCGACGTCGACAAGGCAGTCGCCGCCGCCAAGCGCG
CGTTCGAGACGTTCTCGGTGACCAGCCGCGAAGAGCGTATCGCGCTGCTGGAGAAGGTGGTCGCGATCTACAAGAGCCGG
ATGAAGGAAATCGGCGCTGCGATCTCCGACGAGATGGGCGCGCCGCTGCCGATGGCCGAGAAGATGCAGGCCGGCGCCGG
CCTCGGCCACATCATGTCGACGCTCGACGTGCTGAAGAACTATCAGTTCGAGGAGCCGCTCGGCTCGGCGATGATCGTGC
GTGAGCCGATCGGCGTCGTCGGCATGATCACGCCGTGGAACTGGCCGCTCAATCAGATCGCCTGCAAGGTTGCGCCGGCG
ATCGCGGCCGGCTGCACCATGGTGCTGAAGCCGAGCGAATTCACCCCGACCTCGGCGCTGCTGTTCGCCGAAATCCTGCA
CGAAGCCGGCGTGCCGAAGGGCGTGTTCAACCTCGTCAACGGCCTTGGCCCGGAGGTCGGCGCGGCGATGAGCGAGCATC
CCGACATCGACATGATCTCGTTCACCGGCTCGACTCGCGCCGGCATCGACGTCGCCCAGCGCGCTGCGCCGACGGTGAAG
CGCGTCAGCCAGGAACTTGGCGGCAAGTCGCCGAATGTCATCCTCGAGGATGCCGACCTGACCAAGGCGGTGACCGGCGG
CGTGATGCACATGTTCAACAACTCCGGCCAGTCGTGCAACGCGCCGAGCCGGATGATCGTGCCGCTGTCGAAGATGAAGG
AGGTCGCGGCGATCGCCAAGGGCGTCGCCGAGAAGACCAAGGCCGGCGATCCGCGCGGCGAAGGCACCACCATCGGCCCG
GTCGTCAACCGCATCCAGTGGGACAAGATCCAGACGCTGATCAACAAGGGCATCGAAGAGGGCGCCACCCTGGTCGCCGG
CGGTCCCGGCCTGCCGGAAGGCGTCAACAAGGGCTTCTATGTGCGCCCGACGGTGTTCGCTGACGTCACCAAGGACATGA
CCATCGCGCGCGAAGAAATCTTCGGGCCGGTGCTGGTGATCATGGGCGCCAAGGACGAGAACGAAGCGGTCGAACTTGCC
AACGACACGCCGTATGGTCTGGCCGGCTATGTCTCGGCGGGCTCGGTTGATCGCGCCCGCGCGGTCGGCCGCAAGATCCG
CGCCGGCAACGTCAACCTGCAGGGCGTGCCCAACGAACGCACCGCGCCGTTCGGCGGCTACAAGCAGTCGGGCAACGGCC
GCGAGTGGGGCAAGTTCGGTCTCGAAGAATATCTCGAGGTCAAGGCGATCGCCGGCTTCAACGCCGCGTAA

Protein sequence :
MVNRMQFYIDGAWVDPVVKKSTPVVNPATEEAMYEVALGSKADVDKAVAAAKRAFETFSVTSREERIALLEKVVAIYKSR
MKEIGAAISDEMGAPLPMAEKMQAGAGLGHIMSTLDVLKNYQFEEPLGSAMIVREPIGVVGMITPWNWPLNQIACKVAPA
IAAGCTMVLKPSEFTPTSALLFAEILHEAGVPKGVFNLVNGLGPEVGAAMSEHPDIDMISFTGSTRAGIDVAQRAAPTVK
RVSQELGGKSPNVILEDADLTKAVTGGVMHMFNNSGQSCNAPSRMIVPLSKMKEVAAIAKGVAEKTKAGDPRGEGTTIGP
VVNRIQWDKIQTLINKGIEEGATLVAGGPGLPEGVNKGFYVRPTVFADVTKDMTIAREEIFGPVLVIMGAKDENEAVELA
NDTPYGLAGYVSAGSVDRARAVGRKIRAGNVNLQGVPNERTAPFGGYKQSGNGREWGKFGLEEYLEVKAIAGFNAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-48 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPA2153 NP_947498.1 aldehyde dehydrogenase VFG0082 Protein 1e-48 43